Lists the supported GSEA methods by sparrow

sparrow_methods()

Value

a character vector of GSEA names, or a list of metadata for each method.

Examples

sparrow_methods()
#>            method test_type  inputs package dependancy
#> 1          camera preranked results   limma   required
#> 2        cameraPR preranked results   limma   required
#> 3           fgsea preranked results   fgsea  suggested
#> 4             ora       ora results     ora   required
#> 5             fry preranked    full   limma   required
#> 6           roast preranked    full   limma   required
#> 7           romer preranked    full   limma   required
#> 8           goseq       ora results   goseq  suggested
#> 9     geneSetTest preranked results   limma   required
#> 10          logFC preranked  notest   limma   required
#> 11 svdGeneSetTest      meta    full sparrow   required
#>                                                              comment
#> 1                                                                   
#> 2                                                                   
#> 3                                                                   
#> 4  A generic wrapper to the limma::kegga (biased) enrichment testing
#> 5                                                                   
#> 6                                                                   
#> 7                                                                   
#> 8                                                                   
#> 9                                                                   
#> 10                                                                  
#> 11