We provide examplar expression data (counts or voomed) as well as exemplar gene sets in different forms.
exampleExpressionSet(
dataset = c("tumor-vs-normal", "tumor-subtype"),
do.voom = TRUE
)
exampleGeneSets(x, unlist = !missing(x))
exampleGeneSetDb()
exampleBiocSet()
exampleGeneSetDF()
exampleSparrowResult(cached = TRUE, methods = c("cameraPR", "fry"))
exampleDgeResult(
species = "human",
id.type = c("entrez", "ensembl"),
induce.bias = NULL
)Character vector indicating what samples wanted, either
"tumor-vs-normal" for a tumor vs normal dataset from TCGA, or
just the tumor samples from the same annotated with subtype.
If TRUE, a voomed EList is returned, otherwise an ExpressionSet of counts.
If provided, an expression/matrix object so that the genesets are returned as (integer) index vectors into the rows of x whose rownames match the ids in the geneset.
return the genesets as nested list of lists (default: TRUE).
The top level lists corresponds to the collection, and the lists within
each are the inidividual gene sets. If FALSE, a single list of genesets
is returned.
If TRUE (default), returns a pre-saved SparrowResult object.
Otherwise calculates a fresh one using the methods provided
the methods to use to create a new SparrowResult for.
the species to return the example result from (right now, only "human")
the type of identifiers to use: "entrez" (default) or
"ensembl".
We can simulate a bias on the pvalue by the gene's
"effective_length" or "AveExpr". These are columns that are included
in the output. If NULL, no bias is introduced into the result.
A list of lists of entrezIDs when as == 'lol', or
a list of integers into the rows of x.
The expression data is a subset of the TCGA BRCA indication. Calling
exampleExpressionSet(do.voom = TRUE) will return a voomed EList version
of the data. When do.voom = FALSE, you will get a DGEList of the counts
Returns gene sets as either a list of feature identifiers. Entrez identifiers
are used. If x is provided, integers that index into the expression
container x are used (this is a legacy feature that we should nuke).
Returns gene sets as a GeneSetDb object
Returns gene sets as a BiocSet object
Returns a data.frame of gene set definitions. A data.frame of this form
can be passed into the GeneSetDb() contructor.
vm <- exampleExpressionSet()
head(exampleGeneSets())
#> $c2
#> $c2$VANTVEER_BREAST_CANCER_ESR1_DN
#> [1] "3620" "4175" "160897" "8566" "55503" "1535" "29015" "27436"
#> [9] "51029" "203413" "25975" "1058" "1672" "10982" "2296" "262"
#> [17] "9833" "5937" "4174" "26227" "5558" "2023" "29968" "9582"
#> [25] "23216" "1536" "54443" "11173" "4828" "1054" "3854" "1476"
#> [33] "3898" "51072" "7360" "8303" "140885" "5552" "51704" "9749"
#> [41] "56935" "7851" "11004" "5962" "7453" "3267" "56833" "5214"
#> [49] "55143" "9918" "6648" "7347" "26136" "221150" "23603" "6624"
#> [57] "8326" "7388" "26511" "54757" "641" "5500" "4478" "9911"
#> [65] "55210" "3613" "23616" "7368" "8833" "440" "8690" "11240"
#> [73] "387103" "51026" "4690" "8645" "64764" "27153" "1001" "23198"
#> [81] "1827" "329" "9133" "133" "6948" "11182" "29094" "1612"
#> [89] "4953" "260436" "9721" "1183" "26330" "2597" "55905" "6376"
#> [97] "3945" "168455" "1515" "6489" "11010" "10158" "10130" "4281"
#> [105] "4904" "25923" "3024" "8438" "58527" "3608" "3783" "11025"
#> [113] "1844" "6362" "5359" "153830" "483" "57217" "57707" "9111"
#> [121] "11073" "3601" "9404" "3475" "57348" "9519" "51442" "8200"
#> [129] "10950" "2175" "22808" "4316" "54849" "9141" "51700" "4605"
#> [137] "1116" "9435" "5292" "23034" "9168" "4071" "768" "3868"
#> [145] "7124" "3068" "51560" "10133" "51319" "55355" "1824" "55544"
#> [153] "445" "6491" "54149" "4794" "51465" "9019" "5317" "991"
#> [161] "6518" "8099" "4771" "221061" "5918" "274" "55343" "55240"
#> [169] "7128" "53335" "2633" "23650" "3101" "1852" "387521" "10492"
#> [177] "1969" "4678" "7371" "6663" "1503" "1466" "8543" "54815"
#> [185] "29899" "8291" "3855" "10397" "3091" "3455" "114908" "3689"
#> [193] "29970" "4651" "5031" "5236" "2568" "3626" "2173" "6432"
#> [201] "169714" "7979" "375035" "8624" "55165" "64778" "699" "55076"
#> [209] "2230" "11104" "8898" "1075" "6251" "135112" "54478" "6768"
#> [217] "27242" "6352" "4064" "6281" "57480" "23593" "25984" "597"
#> [225] "4067" "9473" "26135" "5360" "440995" "145864" "10477" "8685"
#> [233] "7272" "892" "27074" "55732" "8842" "8568" "23095" "23175"
#>
#> $c2$TURASHVILI_BREAST_CARCINOMA_DUCTAL_VS_LOBULAR_DN
#> [1] "63920" "4281" "4129" "10802" "54829" "283131" "79679"
#>
#> $c2$TURASHVILI_BREAST_LOBULAR_CARCINOMA_VS_DUCTAL_NORMAL_DN
#> [1] "3872" "53832" "64065" "3400" "1360" "26298"
#> [7] "56477" "55664" "1524" "8614" "9452" "26289"
#> [13] "65987" "1573" "4915" "389906" "3861" "147947"
#> [19] "5166" "1756" "3866" "4435" "116441" "866"
#> [25] "3914" "1356" "128153" "51050" "4306" "260293"
#> [31] "5021" "79971" "999" "667" "5304" "10914"
#> [37] "8835" "4256" "23336" "2330" "72" "92906"
#> [43] "55540" "140862" "334" "1264" "25984" "645431"
#> [49] "54102" "6653" "10278" "130574" "59" "6422"
#> [55] "130507" "4604" "563" "23200" "64432" "56987"
#> [61] "5918" "3673" "100129550" "83752" "51700" "760"
#> [67] "56994" "4638" "23650" "2568" "6645" "5174"
#> [73] "115106" "8780" "84668" "5734" "4128" "26136"
#> [79] "157697" "28996" "11279" "3854" "6376" "79192"
#> [85] "3852" "51361" "55228" "84952" "4316" "2591"
#> [91] "2001"
#>
#> $c2$NIKOLSKY_BREAST_CANCER_21Q22_AMPLICON
#> [1] "54059" "1292" "4047" "6573" "23275" "8888" "23181" "1291"
#> [9] "10841" "378832" "104" "80781" "5116" "54039" "84221" "54058"
#>
#> $c2$GOZGIT_ESR1_TARGETS_DN
#> [1] "50861" "7503" "1365" "10611" "91181" "51068"
#> [7] "9236" "4094" "1806" "4267" "7846" "163486"
#> [13] "2066" "3226" "6909" "23499" "100130449" "25800"
#> [19] "57182" "5265" "58191" "10690" "1475" "629"
#> [25] "10103" "8693" "28951" "7033" "54843" "26115"
#> [31] "154661" "727738" "3667" "5621" "3431" "7026"
#> [37] "55317" "4277" "55062" "8408" "6387" "221178"
#> [43] "868" "135398" "84962" "1021" "11098" "55466"
#> [49] "60436" "55796" "771" "6857" "2052" "5618"
#> [55] "6542" "26960" "5099" "4082" "51655" "2627"
#> [61] "374443" "9891" "7057" "171019" "7088" "120224"
#> [67] "3423" "6303" "7436" "728591" "2537" "3169"
#> [73] "5819" "9338" "9881" "7128" "201163" "63874"
#> [79] "323" "5570" "56129" "55283" "83857" "167681"
#> [85] "182" "27086" "100506831" "9663" "5157" "7107"
#> [91] "2861" "3012" "135228" "23508" "646903" "81031"
#> [97] "8573" "4771" "2798" "169200" "23143" "2181"
#> [103] "2934" "6205" "8644" "286144" "5165" "7903"
#> [109] "100287696" "149986" "1952" "799" "3119" "744"
#> [115] "90161" "55105" "57522" "4430" "4133" "64002"
#> [121] "147949" "124446" "9194" "4148" "22836" "319103"
#> [127] "3363" "9413" "27075" "11221" "165679" "56122"
#> [133] "10486" "114907" "7772" "1948" "8934" "28984"
#> [139] "26154" "51473" "378938" "6446" "26033" "1356"
#> [145] "285382" "54809" "4591" "64332" "3488" "3725"
#> [151] "257068" "375449" "4646" "23189" "1588" "6505"
#> [157] "80781" "100127983" "91746" "1558" "6337" "8365"
#> [163] "10379" "214" "10125" "10160" "4121" "5783"
#> [169] "84981" "18" "1545" "23530" "140462" "3429"
#> [175] "2625" "4680" "100101938" "54549" "55384" "8706"
#> [181] "6482" "7424" "201895" "171024" "2494" "687"
#> [187] "26052" "84619" "23321" "9123" "728342" "6535"
#> [193] "116071" "51466" "79949" "10753" "284361" "7358"
#> [199] "100287616" "2899" "6662" "5796" "11254" "7076"
#> [205] "2258" "643008" "9871" "151742" "5167" "8611"
#> [211] "5939" "6781" "9315" "3497" "3983" "8825"
#> [217] "118430" "6019" "152926" "7352" "5874" "3760"
#> [223] "3087" "51097" "5648" "151354" "29103" "55061"
#> [229] "54477" "960" "7227" "283278" "8614" "8542"
#> [235] "51566" "55740" "1960" "56937" "2036" "5104"
#> [241] "56126" "9060" "79966" "100506966" "57619" "23710"
#> [247] "5979" "6277" "57198" "3964" "346389" "10457"
#> [253] "6035" "2530" "5652" "85444" "55744" "57007"
#> [259] "9990" "7317" "9914" "64168" "340239" "7769"
#> [265] "112399" "5569" "5573" "84189" "64116" "259230"
#> [271] "12" "100289026" "10512" "57575" "6451" "23543"
#> [277] "10079" "6658" "6558" "5671" "151473" "9120"
#> [283] "5578" "22882" "55250" "79971" "2674" "22949"
#> [289] "10560" "124220" "28965" "8527" "481" "55603"
#> [295] "51454" "4300" "11257" "6397" "4254" "222537"
#> [301] "100506492" "9805" "5046" "283537" "283554" "441027"
#> [307] "144100" "10551" "55342" "58513" "1834" "1281"
#> [313] "29082" "2877" "11057" "28996" "1646" "202"
#> [319] "23236" "56271" "3791" "5675" "23181" "123036"
#> [325] "56952" "489" "23111" "23362" "81849" "56850"
#> [331] "3480" "56477" "8349" "8942" "56475" "2571"
#> [337] "80144" "7052" "154141" "285368" "23200" "388403"
#> [343] "3934" "8537" "100287017" "130026" "9135" "79047"
#> [349] "64089" "388722" "646600" "154089" "145978" "390"
#> [355] "10577" "284266" "57419" "51313" "9500" "57568"
#> [361] "25936" "253782" "57093" "283481" "9687" "93517"
#> [367] "85004" "54858" "219995" "10161" "285103" "7351"
#> [373] "2099" "54511" "57801" "4286" "374" "57758"
#> [379] "3655" "134111" "26974" "196" "440515" "9720"
#> [385] "4016" "10970" "6619" "389834" "344148" "1363"
#> [391] "23158" "50810" "3669" "7716" "357" "10819"
#> [397] "3229" "84937" "85012" "2495" "100507049" "1501"
#> [403] "384" "255743" "5914" "1906" "6429" "644873"
#> [409] "100147773" "7039" "6990" "54806" "283209" "10439"
#> [415] "6402" "9019" "55558" "9764" "23433" "23007"
#> [421] "56649" "1645" "8609" "4000" "100505880" "7035"
#> [427] "23213" "3437" "23555" "92689" "2903" "151963"
#> [433] "79667" "84333" "131870" "79022" "4664" "642852"
#> [439] "79624" "27092" "347" "401233" "91862" "55008"
#> [445] "316" "4814" "7357" "6657" "6352" "404093"
#> [451] "288" "100131512" "100506418" "7291" "55357" "219287"
#> [457] "134147" "57717" "79875" "23767" "8777" "3098"
#> [463] "9630" "64750" "440335" "28517" "116372" "367"
#> [469] "10538" "1382" "1048" "11145" "2045" "2938"
#> [475] "3665" "26049" "653" "1191" "4363" "7366"
#> [481] "22943" "100288985" "221935" "401022" "54894" "6827"
#> [487] "1030" "858" "9215" "94122" "3213" "7031"
#> [493] "22876" "81789" "23190" "2852" "1850" "3953"
#> [499] "11155" "5174" "8991" "79983" "84958" "8829"
#> [505] "3223" "84677" "10966" "50807" "221303" "402778"
#> [511] "5696" "80129" "81671" "338758" "8110" "9353"
#> [517] "151230" "7077" "145788" "7837" "8357" "55137"
#> [523] "1602" "57669" "131034" "1826" "9531" "11025"
#> [529] "79977" "644" "143686" "255488" "55281" "3696"
#> [535] "53820" "6676" "23382" "10321" "2263" "56521"
#> [541] "658" "54769" "2202" "107" "9282" "10529"
#> [547] "3899" "3489" "785" "4599" "2043" "6506"
#> [553] "168090" "5507" "58473" "57688" "246" "115908"
#> [559] "83699" "27164" "7045" "100507164" "122786" "123099"
#> [565] "9424" "2195" "200958" "54491" "84941" "27010"
#> [571] "1837" "29922" "91252" "64798" "7421" "219285"
#> [577] "9823" "2952" "2239" "5217" "84875" "11030"
#> [583] "160335" "8339" "58986" "57535" "56165" "51101"
#> [589] "10124" "9961" "81704" "22837" "115" "5930"
#> [595] "64067" "83872" "7429" "140733" "4850" "6772"
#> [601] "7494" "23180" "4925" "9342" "83897" "10475"
#> [607] "55711" "55764" "9495" "29844" "123096" "23641"
#> [613] "158866" "22996" "116039" "8722" "11001" "132720"
#> [619] "9050" "3206" "9201" "59342" "8743" "10743"
#> [625] "100506994" "256281" "7766" "57600" "2001" "9518"
#> [631] "4897" "406991" "9289" "5672" "79083" "9905"
#> [637] "5241" "84766" "8418" "132864" "79170" "2203"
#> [643] "1831" "23524" "1520" "2983" "55213" "146691"
#> [649] "4128" "8821" "145741" "7042" "1543" "634"
#> [655] "7852" "9249" "604" "100507389" "1977" "8503"
#> [661] "93349" "5793" "4325" "6196" "220047" "6672"
#> [667] "54739" "8463" "11015" "253512" "54748" "9734"
#> [673] "155465" "401546" "200844" "4644" "8337" "10451"
#> [679] "100507376" "205" "29995" "55620" "10783" "7356"
#> [685] "23024" "4982" "330" "10826" "116449" "29108"
#> [691] "4586" "3113" "9" "118980" "3434" "51363"
#> [697] "10964" "926" "283131" "8001" "121274" "85439"
#> [703] "399717" "1374" "10207" "4753" "10265" "100506847"
#> [709] "100129502" "55536" "399665" "754" "860" "51090"
#> [715] "23461" "6553" "9788" "131368" "91373" "5121"
#> [721] "1917" "4502" "10769" "10493" "1287" "10544"
#> [727] "5238" "64764" "2634" "22843" "81552" "6925"
#> [733] "26166" "29094" "7402" "84909" "283987" "91894"
#> [739] "645431" "286343" "83593" "148741" "3860" "5678"
#> [745] "57561" "7056" "167691" "4053" "221393" "25805"
#> [751] "22924" "54020" "166336" "112483" "1958" "10401"
#> [757] "11043" "57214" "3433" "80183" "84159" "374378"
#> [763] "26998" "64386" "54847" "4939" "6445" "4685"
#> [769] "3487" "11274" "195814" "3069" "4477" "2042"
#> [775] "4070" "22941" "57221" "6398" "112770" "81617"
#> [781] "200734"
#>
#> $c2$PUJANA_BREAST_CANCER_WITH_BRCA1_MUTATED_UP
#> [1] "6117" "11104" "10473" "10772" "10051" "5411" "10915" "8317" "10403"
#> [10] "4175" "4171" "11340" "4678" "991" "22823" "1763" "3609" "10212"
#> [19] "2146" "25842" "9295" "4690" "983" "27338" "1031" "10635" "5983"
#> [28] "9918" "4436" "9212" "3161" "6626" "1058" "7027" "9125" "4173"
#> [37] "4605" "7913" "7398" "11073" "4174" "3930" "4361" "2305" "641"
#> [46] "3925" "1786" "6502" "4068" "8458" "6790" "8438" "790" "5984"
#> [55] "9702" "22934"
#>
#> $c2$CHARAFE_BREAST_CANCER_BASAL_VS_MESENCHYMAL_DN
#> [1] "219654" "3589" "6000" "154043" "7204" "4017" "23333" "586"
#> [9] "221687" "55437" "55701" "7857" "1292" "7402" "7187" "221662"
#> [17] "4325" "9891" "10019" "123920" "5214" "6474" "26289" "6935"
#> [25] "10687" "10371" "4131" "23331" "10085" "115701" "3797" "10365"
#> [33] "333" "51454" "2869" "7280" "221061" "2318" "2535" "627"
#> [41] "151963" "4267" "2887" "81792" "2791" "55114" "9945" "10318"
#> [49] "9915" "137392"
#>
#> $c2$HEDENFALK_BREAST_CANCER_BRACX_DN
#> [1] "54940" "10938" "23770" "8847" "4673" "7813" "11234" "10841" "4301"
#> [10] "8874" "64921" "9295" "10988" "6840" "54971" "10390" "24148" "51366"
#> [19] "2033" "10492"
#>
#> $c2$HUPER_BREAST_BASAL_VS_LUMINAL_UP
#> [1] "1825" "5744" "2171" "667" "182" "6279" "51458" "10630"
#> [9] "771" "5268" "5317" "6382" "9635" "3552" "9536" "5266"
#> [17] "2697" "3713" "1828" "5270" "6278" "9547" "3655" "27065"
#> [25] "8076" "6698" "10397" "3553" "6273" "8626" "1645" "9119"
#> [33] "55214" "2810" "25800" "6590" "9638" "1475" "2709" "6280"
#> [41] "4319" "6286" "23650" "2877" "6699" "5803" "3853" "347902"
#> [49] "3868" "5654" "10631" "23767" "360" "1646"
#>
#> $c2$SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP
#> [1] "64151" "4141" "1869" "3925" "55388" "9156" "10963" "10460"
#> [9] "7334" "10471" "891" "10721" "83737" "27338" "10403" "332"
#> [17] "9837" "991" "9688" "6790" "4751" "25788" "146909" "84790"
#> [25] "10376" "890" "9868" "29980" "51203" "8270" "79075" "6637"
#> [33] "11339" "9088" "3833" "9928" "4173" "10112" "10615" "56941"
#> [41] "1111" "2305" "5718" "4605" "51155" "983" "55355" "4288"
#> [49] "8366" "5440" "6636" "8914" "6182" "4830" "79733" "9134"
#> [57] "11004" "8318" "26519" "1017" "79980" "22974" "56992" "23234"
#> [65] "3838" "3161" "23475" "5888" "5347" "705" "56942" "701"
#> [73] "23210" "3149" "4172" "29127" "4171" "10204" "23397" "79682"
#> [81] "10212" "7295" "26255" "9133" "7296" "55165" "11130" "1894"
#> [89] "641" "22948" "55143" "3052" "9212" "23560" "3015" "5688"
#> [97] "6241" "10535" "9055" "5984" "6472" "9700" "9582" "2146"
#> [105] "4175" "259266" "29095" "7272" "54892" "94239" "26271" "993"
#> [113] "7112" "1063" "8140" "4521" "2491" "10024" "6921" "24137"
#> [121] "9787" "1058" "1062" "83461" "2237" "1033" "9232" "4001"
#> [129] "3832" "54478" "51512" "6631" "79581" "23590" "55839" "699"
#> [137] "29088" "4085" "55010" "1349" "7443" "8833" "9833" "9319"
#> [145] "11260" "6491" "11065" "54069" "55969" "1164" "7153"
#>
#> $c2$REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS
#> [1] "1000" "1001" "1002" "1003" "1004" "1005" "1006" "1007"
#> [9] "1008" "1009" "1010" "1012" "1013" "1016" "1495" "1499"
#> [17] "1500" "23705" "253559" "25945" "3728" "5817" "5818" "5819"
#> [25] "64403" "81607" "999"
#>
#> $c2$DARWICHE_PAPILLOMA_RISK_HIGH_VS_LOW_DN
#> [1] "6449" "57455" "374618" "55192" "57817" "2775" "5567" "50509"
#> [9] "6324" "7371" "3691" "761" "57642" "7225" "202500" "7273"
#> [17] "55363" "284654" "27291" "23207" "3507" "3899" "4946" "54065"
#> [25] "80210" "57658" "6376" "6787" "3957" "2686" "54993" "5708"
#>
#> $c2$BURTON_ADIPOGENESIS_PEAK_AT_2HR
#> [1] "3164" "7130" "5743" "2919" "9361" "23645" "9531" "3099" "3399"
#> [10] "1052" "30850" "2354" "1843" "57007" "1039" "7422" "3491" "7057"
#> [19] "57381" "3337" "2353" "6574" "7832" "2303" "7465" "54206" "9314"
#> [28] "3398" "823" "22822" "10512" "10049" "7133" "1490" "4609" "11080"
#> [37] "4929" "7538" "10912" "133" "3726" "3397" "5606" "5997" "5054"
#> [46] "388" "8870" "2010" "3569" "5292" "2114"
#>
#> $c2$BYSTRYKH_HEMATOPOIESIS_STEM_CELL_IL3RA
#> [1] "29950" "896" "5879" "4297" "2623" "285220" "7423" "10134"
#> [9] "2978"
#>
#> $c2$YAMASHITA_LIVER_CANCER_STEM_CELL_DN
#> [1] "2328" "10891" "64240" "1582" "8856" "3827" "6647" "2181"
#> [9] "1066" "8647" "64577" "929" "2180" "1029" "7364" "729"
#> [17] "83758" "8824" "2950" "3818" "11001" "2948" "5648" "116519"
#> [25] "6554" "5243" "10747" "732" "1576" "5244" "6819" "9420"
#> [33] "2182" "731" "5580" "4835" "4217" "4329" "109" "51703"
#> [41] "2171" "1647" "6591" "7057" "2099" "5603" "4616" "55466"
#> [49] "3156" "325" "2944" "10840" "462" "1544" "5916" "1581"
#> [57] "6291" "3273" "2158" "9970" "2160" "715" "5605" "4128"
#> [65] "5289" "346" "316" "3172" "2289" "1558" "2938" "7366"
#> [73] "6822" "1551" "2329" "5288"
#>
#> $c2$GUTIERREZ_WALDENSTROEMS_MACROGLOBULINEMIA_1_UP
#> [1] "104" "5244" "2550" "60468" "27244" "10863" "3566" "3708" "334"
#>
#> $c2$BIOCARTA_AGPCR_PATHWAY
#> [1] "5579" "5578" "5577" "5567" "5568" "2778" "408" "2792" "2782" "5573"
#> [11] "5576" "5575" "2868"
#>
#> $c2$REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK
#> [1] "10125" "10161" "10235" "10287" "10316" "10681" "10800" "10874"
#> [9] "10886" "10887" "10911" "1128" "1131" "1133" "11343" "115557"
#> [17] "1241" "128674" "129521" "1385" "139189" "146" "147" "148"
#> [25] "156" "1606" "1607" "1608" "160851" "1609" "183" "1839"
#> [33] "185" "1902" "1906" "1907" "1908" "1909" "1910" "1956"
#> [41] "2147" "2149" "2150" "2151" "221955" "222545" "23236" "23566"
#> [49] "2358" "23620" "2520" "257313" "2641" "2642" "2693" "27334"
#> [57] "2767" "2769" "2776" "2782" "2783" "2784" "2785" "2786"
#> [65] "2787" "2788" "2790" "2791" "2792" "2793" "2796" "2797"
#> [73] "2798" "2828" "2829" "2837" "2840" "2846" "2847" "2862"
#> [81] "2864" "2865" "2867" "2869" "2885" "2922" "2925" "29933"
#> [89] "301" "3060" "3061" "3062" "3265" "3269" "3356" "3357"
#> [97] "3358" "347148" "351" "3709" "3710" "3814" "3827" "3845"
#> [105] "387129" "4295" "4314" "431704" "4828" "4829" "4893" "4922"
#> [113] "4923" "5020" "5021" "5028" "5029" "5031" "5032" "51738"
#> [121] "51764" "5290" "5295" "5296" "5330" "5331" "5332" "5367"
#> [129] "54331" "551" "552" "553" "5578" "5580" "5581" "5583"
#> [137] "5588" "5594" "5595" "55970" "5598" "5604" "5605" "56413"
#> [145] "56923" "57105" "57113" "5724" "5731" "5737" "5894" "59345"
#> [153] "594857" "5997" "6195" "6196" "6197" "623" "624" "6288"
#> [161] "6375" "64106" "64407" "6654" "680" "6846" "6863" "6865"
#> [169] "6866" "6869" "6870" "6915" "7200" "7201" "7204" "7222"
#> [177] "7225" "730221" "730335" "730413" "731823" "747" "7529" "8111"
#> [185] "84109" "84432" "84539" "846" "84634" "8477" "8503" "8526"
#> [193] "8527" "8620" "885" "886" "887" "8997" "9002" "9162"
#> [201] "9170" "94233" "94235" "9630" "983"
#>
#> $c2$SCHAEFFER_PROSTATE_DEVELOPMENT_48HR_DN
#> [1] "50619" "8864" "29850" "220382" "10563" "712"
#> [7] "51439" "23221" "5865" "23085" "22920" "29965"
#> [13] "165215" "85453" "84649" "124460" "9612" "2006"
#> [19] "27250" "5297" "387914" "57482" "64754" "23367"
#> [25] "63933" "56937" "57580" "200931" "83937" "90427"
#> [31] "22887" "4319" "23022" "389432" "81550" "55184"
#> [37] "112399" "57381" "3516" "84159" "6563" "25797"
#> [43] "10602" "4211" "6383" "5167" "1475" "7043"
#> [49] "9583" "118881" "10560" "4239" "284358" "6505"
#> [55] "116535" "1604" "27086" "51684" "54470" "57125"
#> [61] "2139" "93100" "79071" "23254" "7881" "23569"
#> [67] "3929" "22801" "143662" "23549" "56905" "23683"
#> [73] "1849" "8609" "7041" "27245" "84448" "677"
#> [79] "5153" "284716" "284252" "117581" "11309" "442213"
#> [85] "94274" "4929" "79660" "387640" "124857" "10584"
#> [91] "54437" "57688" "57568" "1508" "54880" "23429"
#> [97] "8745" "285590" "85458" "8479" "1008" "54856"
#> [103] "8651" "4000" "116443" "4921" "90139" "490"
#> [109] "10160" "8243" "9745" "9353" "6511" "23213"
#> [115] "9260" "388533" "221692" "552" "29760" "684"
#> [121] "3135" "9759" "60528" "2572" "1062" "200132"
#> [127] "10100" "4147" "7071" "5159" "1000" "8502"
#> [133] "8974" "59350" "9732" "64077" "54874" "2983"
#> [139] "79698" "27147" "9467" "10116" "9139" "131408"
#> [145] "1844" "55885" "81832" "651" "8828" "2045"
#> [151] "10645" "230" "64881" "290" "132430" "27303"
#> [157] "399726" "85442" "440097" "1137" "283659" "57818"
#> [163] "3739" "3091" "11183" "2048" "220441" "79575"
#> [169] "10060" "3659" "7305" "8566" "1846" "5408"
#> [175] "8462" "22820" "1601" "81579" "5136" "58475"
#> [181] "6720" "440193" "85004" "11095" "9823" "57124"
#> [187] "2015" "196" "5069" "5900" "7048" "55219"
#> [193] "5579" "2995" "6788" "7130" "64115" "576"
#> [199] "8936" "51566" "9308" "686" "9865" "23389"
#> [205] "3400" "100132074" "30011" "55589" "56474" "54438"
#> [211] "2047" "5311" "5641" "4237" "2044" "269"
#> [217] "10144" "130576" "11278" "64207" "124842" "9938"
#> [223] "22881" "57722" "153090" "84435" "80727" "135138"
#> [229] "4782" "10085" "83854" "5194" "1272" "56301"
#> [235] "795" "7247" "861" "11259" "3479" "4915"
#> [241] "440" "273" "3097" "9123" "375387" "4139"
#> [247] "84668" "9696" "253738" "2824" "79012" "4628"
#> [253] "3676" "7225" "9770" "171024" "8825" "145581"
#> [259] "358" "117154" "10152" "5396" "30811" "155006"
#> [265] "162494" "9215" "9480" "6509" "171019" "387758"
#> [271] "5169" "81553" "53342" "26960" "586" "55349"
#> [277] "5296" "5733" "8404" "55353" "714" "5629"
#> [283] "4282" "114798" "8581" "10397" "256586" "190"
#> [289] "79623" "256536" "367" "8396" "84662" "51015"
#> [295] "3303" "26585" "1305" "9586" "642658" "10741"
#> [301] "151887" "65078" "5744" "9737" "5019" "55799"
#> [307] "344595" "5980" "5316" "83539" "2982" "10417"
#> [313] "83641" "6356" "57491" "9495" "29091" "51555"
#> [319] "83992" "83595" "4488" "862" "25925" "203228"
#> [325] "2560" "8814" "2554" "9119" "10123" "4016"
#> [331] "84168" "3872" "8817" "23284" "390" "4152"
#> [337] "9659" "4325" "81029" "54510" "6484" "26010"
#> [343] "7057" "84959" "51260" "57575" "8913" "9985"
#> [349] "79819" "4090" "1295" "119587" "284654" "2619"
#> [355] "22795" "4602" "4784" "375612" "4314" "25891"
#> [361] "51635" "3554" "1381" "283431" "6092" "337876"
#> [367] "1630" "4739" "9079" "9891" "84206" "157657"
#> [373] "1654" "3727" "92293" "6925" "25849" "886"
#> [379] "85445" "55603" "8242" "91768" "2192" "340419"
#> [385] "9061" "6507" "5728" "9792" "114905" "23135"
#> [391] "170692" "115111" "2561" "3487" "2557" "7483"
#> [397] "2890" "5176" "126868" "10406" "64321" "83698"
#> [403] "5168" "79899" "57628" "3624" "27123" "57685"
#> [409] "257194" "83879" "7045" "57497" "90187" "5407"
#> [415] "362" "4613" "26230" "57452" "23194" "2099"
#> [421] "22921" "7476" "619279" "7503" "57586" "22854"
#> [427] "1909" "1968"
#>
#> $c2$YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_12
#> [1] "52" "441282" "10667" "55699" "4172" "6271" "2768" "1666"
#> [9] "3417" "2791" "64116" "123803" "60412" "50626" "486" "2029"
#> [17] "1879" "713" "27316" "11051" "56994" "6237" "10550" "50814"
#> [25] "841" "4192" "286827" "3959" "9545" "10552" "6618" "1153"
#> [33] "9526" "2771" "51398" "2222" "5091" "3765" "51614" "11328"
#> [41] "5939" "1164" "51501" "192286" "6119" "3028" "8836" "5947"
#> [49] "5720" "4673" "5289" "5019" "55365" "54982" "2014" "3418"
#> [57] "191" "29085" "826" "22949" "118429" "373156" "5859" "56961"
#> [65] "84284" "5121" "23521" "51177" "51661" "6282" "8347" "217"
#> [73] "3455" "10159" "10016" "10916" "79071" "5740" "960"
#>
#> $c2$REACTOME_RAF_MAP_KINASE_CASCADE
#> [1] "3265" "3845" "4893" "5594" "5595" "5604" "5605" "5894" "7529" "983"
#>
#> $c2$CAIRO_PML_TARGETS_BOUND_BY_MYC_UP
#> [1] "4691" "661" "8454" "891" "83879" "8886" "993" "83939" "790"
#> [10] "1019" "5757" "4904" "586" "7057" "4869" "4953" "2012" "3398"
#> [19] "894" "7157" "1977" "7083" "581"
#>
#> $c2$REACTOME_RNA_POL_III_TRANSCRIPTION
#> [1] "10302" "10621" "10623" "11128" "11178" "171568" "2972" "2976"
#> [9] "4781" "51082" "51728" "5434" "5435" "5437" "5440" "5441"
#> [17] "5451" "55290" "55703" "55718" "661" "6617" "6618" "6619"
#> [25] "6621" "6741" "6908" "7702" "84265" "9328" "9329" "9330"
#> [33] "9533"
#>
#> $c2$MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
#> [1] "85007" "8697" "285203" "29087" "3376" "92609" "79982" "9817"
#> [9] "11164" "1615" "84545" "5714" "7965" "29082" "8930" "6597"
#> [17] "55702" "65084" "80173" "3550" "55003" "80218" "10856" "2188"
#> [25] "6566" "9562" "29127" "399979" "171586" "81539" "6742" "84864"
#> [33] "10605" "10576" "23310" "9782" "118487" "10969" "5001" "8886"
#> [41] "2067" "10914" "6183" "5901" "10016" "5684" "9158" "5591"
#> [49] "9616" "2146" "85459" "55520" "7690" "64417" "23592" "151246"
#> [57] "22948" "23658" "4171" "51121" "983" "65110" "84916" "114971"
#> [65] "10146" "4659" "6873" "23262" "128061" "10260" "6632" "889"
#> [73] "80013" "2653" "9801" "4678" "4836" "642477" "53339" "55319"
#> [81] "79736" "51633" "283742" "5527" "51621" "83940" "5704" "54851"
#> [89] "11179" "51773" "7091" "54505" "54534" "25929" "51447" "9702"
#> [97] "56926" "1736" "5189" "167153" "9184" "163081" "8888" "9197"
#> [105] "10992" "51567" "7013" "64431" "5387" "152100" "65057" "580"
#> [113] "1653" "25842" "8666" "134492" "195828" "51501" "3658" "6683"
#> [121] "10926" "25804" "51079" "10632" "55858" "28970" "60496" "3609"
#> [129] "7979" "54939" "80227" "708" "9343" "10480" "55186" "51234"
#> [137] "10393" "4233" "54778" "90580" "84529" "1155" "64794" "55081"
#> [145] "55631" "10116" "54819" "120227" "1111" "22995" "7298" "10254"
#> [153] "80349" "55035" "64864" "10194" "10198" "29116" "55120" "86"
#> [161] "51056" "115416" "79029" "84233" "10221" "55191" "23080" "5203"
#> [169] "115106" "55830" "26098" "23530"
#>
#> $c2$KOMMAGANI_TP63_GAMMA_TARGETS
#> [1] "1026" "10971" "7421" "3486" "4193" "9540" "6604" "3714" "4854"
#>
#> $c2$REACTOME_MRNA_SPLICING_MINOR_PATHWAY
#> [1] "10262" "10594" "10907" "10992" "119358" "22916" "23020" "23450"
#> [9] "23451" "24148" "2962" "2963" "4686" "4809" "51639" "5430"
#> [17] "5431" "5432" "5433" "5434" "5435" "5436" "5437" "5438"
#> [25] "5439" "5440" "5441" "57819" "6426" "6427" "6431" "6432"
#> [33] "652147" "653889" "6628" "6632" "6633" "6634" "6635" "6636"
#> [41] "6637" "83443" "9343" "9410" "9416"
#>
#> $c2$MARIADASON_RESPONSE_TO_BUTYRATE_CURCUMIN_SULINDAC_TSA_2
#> [1] "4758" "7335" "5187" "10577" "7538" "81671" "513" "81631"
#>
#> $c2$LOPEZ_MESOTELIOMA_SURVIVAL_TIME_UP
#> [1] "6790" "332" "51155" "9319" "9833" "64858" "55257" "995"
#> [9] "2317" "129642" "54478" "11332" "24137" "55558"
#>
#> $c2$BOYAULT_LIVER_CANCER_SUBCLASS_G123_DN
#> [1] "10998" "10402" "30" "54988" "23417" "10449" "355" "1756" "55224"
#> [10] "23710" "8856" "23541" "51181" "5106" "3033" "211" "23086" "33"
#> [19] "10166" "3700" "23362" "8671" "23766" "23316" "3373" "84869" "10247"
#> [28] "2534" "2243" "58510" "2639" "9380" "1842" "3242" "6539" "4143"
#> [37] "9104" "54363" "2110" "2157" "8858" "443" "3426" "9154" "2806"
#> [46] "55268" "4522" "6567" "2053" "4482" "10171"
#>
#> $c2$CLAUS_PGR_POSITIVE_MENINGIOMA_DN
#> [1] "1909" "57486" "57493" "25825" "9448" "4071" "91010" "1955" "596"
#> [10] "6659" "11167" "5159"
#>
#>
#> $c6
#> $c6$KRAS.600.LUNG.BREAST_UP.V1_DN
#> [1] "8581" "3860" "23031" "1954" "525" "6278"
#> [7] "7104" "2053" "51806" "79953" "5158" "3713"
#> [13] "6712" "5023" "79097" "1010" "57016" "7137"
#> [19] "10249" "338" "5275" "3851" "10398" "79400"
#> [25] "80761" "6519" "55610" "10268" "3868" "1838"
#> [31] "25840" "440895" "10912" "169611" "54587" "57124"
#> [37] "2261" "7051" "5608" "29799" "3351" "6664"
#> [43] "9547" "242" "7252" "259197" "25809" "5287"
#> [49] "7226" "79148" "5139" "1672" "258" "80162"
#> [55] "3635" "810" "54847" "6332" "10451" "83463"
#> [61] "79957" "5896" "4842" "57007" "8687" "10716"
#> [67] "9472" "113878" "10039" "27165" "9635" "417"
#> [73] "948" "1280" "1805" "27063" "29930" "50832"
#> [79] "80144" "10964" "25806" "1290" "5087" "610"
#> [85] "80070" "5624" "3568" "642671" "100288903" "119"
#> [91] "5816" "8350" "85374" "653423" "3963" "64108"
#> [97] "3779" "4908" "27202" "51214" "55084" "9073"
#> [103] "84991" "114088" "1589" "2593" "3834" "2321"
#> [109] "388714" "3449" "4524" "2015" "64097" "3965"
#> [115] "3485" "55258" "79887" "221078" "51156" "8743"
#> [121] "154661" "923" "283345" "64167" "23242" "10086"
#> [127] "6261" "2668" "7915" "3354" "57523" "1382"
#> [133] "623" "10076" "797" "6536" "10665" "8739"
#> [139] "8578" "6559" "8911" "5919" "79635" "2557"
#> [145] "1014" "676" "79958" "4625" "5540" "23129"
#> [151] "2246" "8424" "10242" "10297" "2812" "79085"
#> [157] "3848" "5737" "59335" "55150" "51704" "4814"
#> [163] "64066" "1360" "129080" "10004" "9413" "3595"
#> [169] "11191" "51206" "84223" "9755" "1410" "8842"
#> [175] "79661" "55776" "26290" "4261" "55534" "5126"
#> [181] "9844" "1807" "26261" "7306" "79175" "10686"
#> [187] "79799" "3579" "25861" "85359" "57604" "7781"
#> [193] "9742" "1310" "6336" "54441" "6283" "54875"
#> [199] "55028" "22999" "6317" "9843" "11279" "8991"
#> [205] "2633" "5795" "8541" "55277" "50489" "4214"
#> [211] "8809" "7356" "2811" "26083" "3592" "5458"
#> [217] "23500" "5076" "79703" "957" "9149" "6531"
#> [223] "80833" "79839" "5818" "3567" "79166" "51316"
#> [229] "710" "11238" "79755" "346157" "8499" "140"
#> [235] "4760" "79725" "3745" "1381" "79986" "25770"
#> [241] "11118" "7059" "8086" "3050" "10993" "41"
#> [247] "9172" "6401" "22829" "50509" "90993" "55799"
#> [253] "644974" "50616" "5920" "51087" "149628" "3613"
#> [259] "30819" "54993" "3213" "1750" "25794" "1158"
#> [265] "58510" "25893" "51754" "54474" "921" "79961"
#> [271] "170679" "100507605" "56603" "2619" "1133" "63904"
#> [277] "64975" "2890" "22914" "79852" "2634" "56154"
#> [283] "43849" "6457" "3950" "26291" "8303" "8736"
#> [289] "3352"
#>
#> $c6$KRAS.600.LUNG.BREAST_UP.V1_UP
#> [1] "9173" "3598" "3290" "5473" "6447" "6374"
#> [7] "4319" "4312" "1440" "89795" "29114" "3885"
#> [13] "11082" "5138" "27178" "23676" "5950" "3294"
#> [19] "57829" "6690" "7850" "10170" "101" "50486"
#> [25] "3624" "56729" "266" "2920" "1839" "654"
#> [31] "909" "2672" "60598" "3249" "639" "2113"
#> [37] "54752" "2921" "2745" "7015" "27112" "5649"
#> [43] "6781" "54544" "3976" "27158" "3445" "6616"
#> [49] "9966" "3673" "54744" "1041" "3576" "2828"
#> [55] "4318" "3747" "4901" "3798" "51454" "27434"
#> [61] "64084" "79368" "29044" "6035" "4620" "2919"
#> [67] "1496" "3669" "793" "6192" "9971" "10253"
#> [73] "51561" "6364" "401034" "7462" "1770" "3770"
#> [79] "9732" "8728" "3706" "26212" "5646" "51129"
#> [85] "23762" "11155" "10402" "5801" "57733" "28231"
#> [91] "3237" "1437" "7128" "919" "3746" "1135"
#> [97] "28424" "6926" "3800" "83447" "4753" "81796"
#> [103] "7185" "9038" "2556" "1235" "25758" "1208"
#> [109] "9892" "55001" "29948" "11174" "2922" "951"
#> [115] "4879" "208" "3037" "1084" "2" "57821"
#> [121] "3486" "9081" "196475" "51270" "27288" "80380"
#> [127] "5617" "2995" "79168" "400451" "11343" "7681"
#> [133] "10103" "7258" "7869" "330" "856" "50863"
#> [139] "1240" "5743" "3398" "6473" "83734" "51193"
#> [145] "9047" "92552" "5959" "250" "3884" "9590"
#> [151] "4066" "191585" "54866" "1780" "284266" "23643"
#> [157] "9196" "2118" "64663" "3553" "4803" "10394"
#> [163] "28959" "4151" "54596" "25879" "84754" "148066"
#> [169] "26272" "731568" "25960" "23645" "7139" "9271"
#> [175] "81789" "5396" "1299" "2203" "10648" "10089"
#> [181] "27179" "4914" "3741" "160518" "5329" "3231"
#> [187] "131566" "9313" "643314" "6528" "55107" "2123"
#> [193] "7399" "4324" "7035" "5602" "7476" "51032"
#> [199] "55753" "1649" "383" "25907" "81849" "54490"
#> [205] "80008" "9734" "3902" "50487" "6689" "79846"
#> [211] "3080" "10319" "4023" "100129271" "201191" "79446"
#> [217] "2324" "55507" "10371" "3972" "4653" "80128"
#> [223] "2903" "6804" "6755" "50856" "6367" "150160"
#> [229] "10744" "27324" "83478" "54954" "9435" "64321"
#> [235] "650" "6425" "6855" "646649" "668" "2527"
#> [241] "2826" "112939" "3090" "4105" "1673" "4868"
#> [247] "4618" "4796" "9024" "55613" "79891" "5740"
#> [253] "8877" "63978" "5365" "347240" "9353" "202018"
#> [259] "51179" "57101" "495" "5645" "6663" "4684"
#> [265] "11009" "2791" "3757" "3284" "4477" "80263"
#> [271] "786" "7471" "11283" "51816" "4110" "8190"
#> [277] "7122" "83483" "10316" "4897" "910" "2670"
#> [283] "79981" "79999" "11126" "6276" "3617" "56891"
#>
#> $c6$KRAS.BREAST_UP.V1_DN
#> [1] "79957" "5243" "79625" "525" "5454" "23031"
#> [7] "4842" "7104" "1838" "5023" "957" "2053"
#> [13] "113878" "644974" "6332" "79635" "3215" "9172"
#> [19] "5139" "9746" "4908" "5818" "11191" "283345"
#> [25] "341651" "10912" "55693" "154661" "114088" "284001"
#> [31] "80162" "100129482" "7137" "417" "79953" "1807"
#> [37] "10993" "79799" "9113" "29799" "338" "1961"
#> [43] "4776" "11096" "10085" "4881" "80852" "5027"
#> [49] "2812" "3738" "23554" "80070" "25770" "1392"
#> [55] "80833" "242" "610" "55262" "54785" "259197"
#> [61] "253982" "27165" "10086" "80144" "6712" "8809"
#> [67] "8687" "5737" "51156" "9073" "10665" "3834"
#> [73] "10268" "51352" "10004" "51162" "41" "55084"
#> [79] "11279" "56667" "710" "5626" "3449" "1010"
#> [85] "79887" "29930" "1954" "10398" "3250" "55277"
#> [91] "4524" "51050" "51013" "56154" "1381" "5129"
#> [97] "84679" "79961" "79400" "3760" "9899" "27063"
#> [103] "773" "2261" "11238" "8991" "797" "57348"
#> [109] "8048" "27293" "8368" "7781" "84991" "84694"
#> [115] "1805" "54847" "64174" "7252" "8536" "440925"
#> [121] "4625" "3786" "26584" "2268" "5087" "10333"
#> [127] "1589" "388714" "3050" "9942" "6546" "1421"
#> [133] "51206" "5197" "442258" "2559" "27343" "2701"
#> [139] "5158" "55534" "3903" "22843" "1290" "7032"
#> [145] "9844"
#>
#> $c6$KRAS.BREAST_UP.V1_UP
#> [1] "9173" "3486" "10170" "57829" "5473" "54544" "4319" "7850"
#> [9] "9971" "27178" "6690" "11082" "6447" "64084" "29114" "11141"
#> [17] "1041" "3294" "55466" "60598" "3290" "3798" "3037" "5138"
#> [25] "9038" "639" "654" "4778" "479" "3885" "201191" "266"
#> [33] "1208" "4861" "5396" "711" "4318" "3747" "3884" "1299"
#> [41] "3744" "250" "7399" "51454" "23676" "2" "4613" "6855"
#> [49] "3976" "5653" "64321" "29044" "1437" "83445" "9283" "643314"
#> [57] "6360" "347240" "2116" "3770" "55540" "3069" "11343" "8000"
#> [65] "8329" "3737" "2672" "440334" "1946" "56105" "43849" "56649"
#> [73] "2327" "55" "1215" "347088" "1240" "2921" "2745" "793"
#> [81] "4993" "2556" "650594" "7185" "8938" "1673" "79168" "3777"
#> [89] "6701" "79368" "51554" "3481" "2703" "652159" "51311" "5596"
#> [97] "9196" "401525" "3561" "57091" "634" "10253" "1084" "7035"
#> [105] "3553" "4948" "51700" "5140" "23645" "9590" "4066" "10417"
#> [113] "3773" "159162" "5545" "330" "646649" "1297" "645784" "29948"
#> [121] "29064" "6276" "27112" "6804" "4901" "80217" "6616" "81833"
#> [129] "2920" "56901" "3598" "196475" "6781" "202018" "57101" "7128"
#> [137] "51384" "8796" "58503" "7681" "55365" "6367" "27299" "4879"
#> [145] "7015" "1496"
#>
#> $c6$KRAS.LUNG.BREAST_UP.V1_DN
#> [1] "8581" "3860" "23031" "1954" "525" "6278"
#> [7] "7104" "2053" "51806" "79953" "5158" "3713"
#> [13] "6712" "5023" "79097" "1010" "57016" "7137"
#> [19] "10249" "338" "5275" "3851" "10398" "79400"
#> [25] "80761" "6519" "55610" "10268" "3868" "1838"
#> [31] "25840" "440895" "10912" "169611" "54587" "57124"
#> [37] "2261" "7051" "5608" "29799" "3351" "6664"
#> [43] "9547" "242" "7252" "259197" "25809" "5287"
#> [49] "7226" "79148" "5139" "1672" "258" "80162"
#> [55] "3635" "810" "54847" "6332" "10451" "83463"
#> [61] "79957" "5896" "4842" "57007" "8687" "10716"
#> [67] "9472" "113878" "10039" "27165" "9635" "417"
#> [73] "948" "1280" "1805" "27063" "29930" "50832"
#> [79] "80144" "10964" "25806" "1290" "5087" "610"
#> [85] "80070" "5624" "3568" "642671" "100288903" "119"
#> [91] "5816" "8350" "85374" "653423" "3963" "64108"
#> [97] "3779" "4908" "27202" "51214" "55084" "9073"
#> [103] "84991" "114088" "1589" "2593" "3834" "2321"
#> [109] "388714" "3449" "4524" "2015" "64097" "3965"
#> [115] "3485" "55258" "79887" "221078" "51156" "8743"
#> [121] "154661" "923" "283345" "64167" "23242" "10086"
#> [127] "6261" "2668" "7915" "3354" "57523" "1382"
#> [133] "623" "10076" "797" "6536" "10665" "8739"
#> [139] "8578" "6559" "8911" "5919" "79635" "2557"
#> [145] "1014"
#>
#> $c6$KRAS.LUNG.BREAST_UP.V1_UP
#> [1] "9173" "3598" "3290" "5473" "6447" "6374" "4319" "4312"
#> [9] "1440" "89795" "29114" "3885" "11082" "5138" "27178" "23676"
#> [17] "5950" "3294" "57829" "6690" "7850" "10170" "101" "50486"
#> [25] "3624" "56729" "266" "2920" "1839" "654" "909" "2672"
#> [33] "60598" "3249" "639" "2113" "54752" "2921" "2745" "7015"
#> [41] "27112" "5649" "6781" "54544" "3976" "27158" "3445" "6616"
#> [49] "9966" "3673" "54744" "1041" "3576" "2828" "4318" "3747"
#> [57] "4901" "3798" "51454" "27434" "64084" "79368" "29044" "6035"
#> [65] "4620" "2919" "1496" "3669" "793" "6192" "9971" "10253"
#> [73] "51561" "6364" "401034" "7462" "1770" "3770" "9732" "8728"
#> [81] "3706" "26212" "5646" "51129" "23762" "11155" "10402" "5801"
#> [89] "57733" "28231" "3237" "1437" "7128" "919" "3746" "1135"
#> [97] "28424" "6926" "3800" "83447" "4753" "81796" "7185" "9038"
#> [105] "2556" "1235" "25758" "1208" "9892" "55001" "29948" "11174"
#> [113] "2922" "951" "4879" "208" "3037" "1084" "2" "57821"
#> [121] "3486" "9081" "196475" "51270" "27288" "80380" "5617" "2995"
#> [129] "79168" "400451" "11343" "7681" "10103" "7258" "7869" "330"
#> [137] "856" "50863" "1240" "5743" "3398" "6473" "83734" "51193"
#> [145] "9047"
#>
#> $c6$CRX_NRL_DN.V1_DN
#> [1] "114625" "25963" "2173" "154" "51330" "25907"
#> [7] "2923" "2138" "93649" "887" "23286" "85004"
#> [13] "1143" "3625" "10487" "3371" "54714" "5924"
#> [19] "2989" "57139" "10924" "10094" "5950" "9317"
#> [25] "79153" "220202" "1958" "8507" "4543" "27095"
#> [31] "83700" "79993" "219790" "6385" "4242" "639"
#> [37] "134637" "3164" "284996" "54836" "64320" "5783"
#> [43] "7125" "57110" "10814" "1687" "3636" "1136"
#> [49] "162427" "3800" "126074" "374969" "4608" "56967"
#> [55] "57626" "9957" "337872" "23234" "4829" "163"
#> [61] "5874" "5339" "4435" "79006" "2969" "8653"
#> [67] "91894" "53342" "5768" "100131017" "3276" "7504"
#> [73] "5172" "6258" "7705" "6692" "25932" "64101"
#> [79] "84320" "84684" "23254" "27164" "84628" "2555"
#> [85] "122786" "4860" "25805" "7307" "7855" "124801"
#> [91] "30000" "340348" "2686" "342184" "5837" "59277"
#> [97] "148808" "8910" "581" "51199" "25945" "10165"
#> [103] "5066" "54664" "162966" "25960" "4790" "1889"
#> [109] "54898" "27065" "5922" "50865" "388585" "81570"
#> [115] "9687" "444" "84864" "131544" "10060" "2556"
#> [121] "503834" "28316" "816" "2898" "146771" "92014"
#> [127] "6239" "1486" "116362" "87769"
#>
#> $c6$CYCLIN_D1_UP.V1_UP
#> [1] "6631" "10063" "5310" "8379" "1263" "5479" "2833" "5763" "7791"
#> [10] "7471" "346" "1969" "1059" "1043" "8312" "6573" "4586" "6237"
#> [19] "1762" "6588" "3397" "5653" "6368" "3339" "5774" "5536" "8519"
#> [28] "607" "2232" "2245" "6195" "3835" "2875" "290" "4324" "886"
#> [37] "9159" "6853" "22937" "5957" "20" "7222" "3983" "10669" "4158"
#> [46] "6256" "1855" "7916" "2813" "1984" "9806" "6010" "6829" "7070"
#> [55] "4140" "6531" "6572" "1489" "836" "768" "4303" "6404" "7185"
#> [64] "8798" "5153" "10151" "1052" "7703" "5805" "762" "641" "23065"
#> [73] "23170" "7084" "1777" "7855" "2968" "9314" "4055" "6890" "6484"
#> [82] "224" "4297" "3110" "6285" "7040" "2128" "495" "5351" "8844"
#> [91] "3028" "6776" "653" "4637" "24142" "335" "7706" "8045" "5648"
#> [100] "881" "5076" "2644" "2981" "9968" "23385" "4478" "6525" "5539"
#> [109] "2492" "8358" "151" "1816" "4818" "3222" "2274" "54498" "7851"
#> [118] "3362" "4778" "55756" "11031" "6876" "26025" "51352" "2805" "9413"
#> [127] "2794" "3101" "3804" "6442" "5138" "2118" "909" "7480" "150"
#> [136] "4985" "25758" "10538" "8514" "274" "2114" "5995" "27065" "6560"
#> [145] "10481" "53358" "4249" "10238" "4143" "4288" "1958" "8857" "7980"
#> [154] "1672" "6536" "3304" "1549" "1284" "4661" "3040" "2720" "3029"
#> [163] "2687" "4752" "10244" "1113" "1376" "7249" "5923" "7056" "649"
#> [172] "11099" "1071" "6257" "1647" "372" "9270" "1138" "5273" "51035"
#> [181] "4713" "8242" "786" "2588" "7905" "10232" "10949" "3270"
#>
#> $c6$GLI1_UP.V1_DN
#> [1] "22818" "143384" "140711" "57583" "81669" "54432" "79712" "23596"
#> [9] "91543" "6580" "55957" "9921" "861" "84074" "10801" "10109"
#> [17] "23607" "23305" "10771" "56987" "80021" "2348" "387521" "51645"
#> [25] "1551" "140606" "23344" "118663" "92521"
#>
#> $c6$CAHOY_NEURONAL
#> [1] "63974" "793" "9956" "2742" "10716" "9615" "79012" "1780"
#> [9] "5999" "9856" "63908" "2558" "10268" "10633" "348980" "2039"
#> [17] "4745" "885" "6750" "64130" "1007" "7087" "54847" "56853"
#> [25] "57084" "23349" "6546" "64388" "283209" "57699" "6534" "1392"
#> [33] "4645" "6804" "5179" "3208" "57586" "4208" "29953" "4922"
#> [41] "388394" "1812" "80333" "53335" "816" "2563" "2566" "131034"
#> [49] "3706" "1310" "2045" "23040" "57495" "7857" "9899" "11249"
#> [57] "6861" "221002" "4747" "64919" "23314" "388662" "6857" "548596"
#> [65] "85453" "6860" "341880" "140689" "125113" "146760" "4621" "85445"
#> [73] "24141" "4905" "400745" "2026" "2845" "2572" "5368" "79751"
#> [81] "3295" "83698" "2254" "1393" "8492" "4741" "2922" "2170"
#> [89] "90523" "56978" "114569" "79006" "4900" "8499" "205147" "64084"
#> [97] "60677" "10368" "84502" "6812"
#>
#> $c6$E2F3_UP.V1_UP
#> [1] "2026" "388228" "9134" "132332" "4324" "1031" "23336" "9308"
#> [9] "116236" "254887" "148398" "4602" "898" "58528" "158399" "1050"
#> [17] "84553" "53346" "134111" "84634" "195828" "25907" "400954" "2261"
#> [25] "2643" "2254" "129607" "11076" "285016" "4091" "9429" "57026"
#> [33] "80139" "576" "5827" "10675" "56548" "85358" "84915" "79683"
#> [41] "5727" "29767" "144455" "29887" "29901" "1028" "51209" "253152"
#> [49] "84733" "51176" "8739" "23462" "80757" "79022" "55540" "9118"
#> [57] "53820" "4747" "1592" "11000" "3110" "3040" "339983" "163933"
#> [65] "51734" "9401" "26996" "84885" "2571" "195977" "7374" "137392"
#> [73] "84206" "3790" "2297" "1633" "202451" "7546" "23576" "3625"
#> [81] "149175" "55964" "11001" "3248" "7782" "1122" "10194" "10125"
#> [89] "81928" "140707" "80318" "387763" "1407" "9143" "1917" "23089"
#> [97] "5426" "65055" "401034" "9738" "7368" "8534" "65078" "27106"
#> [105] "5111" "22835" "23493" "4277" "253650" "23129" "7074" "10656"
#> [113] "23136" "4884" "4861" "90378" "25884" "26033" "64858" "1959"
#> [121] "51016" "84304" "2237" "84456" "64130" "5427" "7025" "25837"
#> [129] "92610" "5300" "51514" "64714" "166979" "140688" "9837" "6877"
#> [137] "4005" "2527" "286336" "56704" "2175" "3205" "81575" "10098"
#> [145] "6530" "84451" "90313" "84302" "646762" "92659" "57088" "4038"
#> [153] "3306" "6261" "54583" "146760" "29028" "80712" "51655" "84771"
#> [161] "147015" "134548" "116238" "23097" "56935" "9435" "154141" "645030"
#> [169] "440829" "8851" "7089" "23221" "147912" "199953" "5726" "79622"
#> [177] "283454" "283658" "83855" "6450" "3742" "26577" "158062" "10278"
#> [185] "201255" "9258" "146330" "283554" "25791" "6508" "529" "146822"
#> [193] "7483" "79929" "6853" "27346"
#>
#> $c6$CYCLIN_D1_UP.V1_DN
#> [1] "10766" "3066" "1981" "251" "857" "10960" "6689" "694"
#> [9] "7024" "4909" "7408" "5816" "5295" "5134" "200081" "3872"
#> [17] "6609" "2319" "9733" "22796" "6258" "5184" "901" "288"
#> [25] "2781" "7372" "2009" "6856" "5173" "9513" "9812" "3805"
#> [33] "9589" "2072" "5320" "5089" "930" "3122" "8546" "547"
#> [41] "2041" "3350" "2623" "1128" "687" "51741" "3071" "3694"
#> [49] "2997" "8239" "822" "6098" "675" "4620" "30" "9820"
#> [57] "405" "573" "7692" "5588" "3609" "3479" "10449" "6617"
#> [65] "2538" "814" "269" "5453" "2584" "7072" "11120" "7140"
#> [73] "23209" "6895" "6857" "5664" "1386" "6259" "23542" "11016"
#> [81] "7200" "5465" "1437" "9517" "8925" "56252" "9367" "4494"
#> [89] "1146" "10978" "4145" "7852" "4842" "4636" "6751" "11006"
#> [97] "6004" "433" "3257" "3624" "795" "51083" "441263" "3273"
#> [105] "6039" "5050" "7277" "259" "2825" "23530" "1618" "7170"
#> [113] "835" "673" "2078" "9169" "4641" "4351" "240" "869"
#> [121] "6017" "5105" "4913" "7169" "3675" "6690" "5775" "3575"
#> [129] "6844" "523" "9694" "9360" "6532" "9472" "2645" "545"
#> [137] "3605" "1359" "7163" "3269" "9674" "93594" "8505" "4361"
#> [145] "6792" "4542" "2549" "3460" "4734" "3208" "6275" "2649"
#> [153] "6702" "11080" "116828" "23212" "1591" "3912" "10638" "90"
#> [161] "6356" "27113" "3552" "2799" "6038" "10781" "177" "57007"
#> [169] "2146" "1482" "7374" "10398" "4238" "9366" "2984" "7584"
#> [177] "10803" "3760" "6820" "842" "4745" "5939" "57326" "439"
#> [185] "3852" "7351" "629" "5049" "2977" "23369" "2626"
#>
#> $c6$ATM_DN.V1_UP
#> [1] "81890" "54739" "55367" "3761" "29104" "4633" "5979" "2209"
#> [9] "3982" "2742" "6898" "7087" "26230" "1299" "10018" "64240"
#> [17] "8291" "2897" "4261" "3487" "7125" "2185" "28234" "7439"
#> [25] "27019" "4051" "8736" "6494" "9356" "1942" "10734" "10272"
#> [33] "11074" "1271" "925" "27285" "2250" "5260" "3699" "29881"
#> [41] "5864" "1114" "6676" "11166" "6375" "948" "9495" "65009"
#> [49] "6529" "7410" "5360" "10873" "8650" "2826" "3558" "8968"
#> [57] "1185" "623" "1757" "2321" "55515" "6853" "4804" "27239"
#> [65] "7294" "1842" "6121" "8140" "1559" "53405" "11009" "9563"
#> [73] "56287" "321" "3293" "8843" "104" "23742" "3891" "1591"
#> [81] "64077" "10351" "58503" "5673" "5028" "4782" "765" "5148"
#> [89] "930" "7422" "1053" "6620" "29924" "2027" "859" "3284"
#> [97] "590" "7276" "31" "8749" "1359" "654231" "1750" "5493"
#> [105] "54210" "7140" "1441" "81492" "2162" "7761" "80328" "2692"
#> [113] "3250" "6819" "4225" "58510" "6274" "4795" "1394" "9401"
#> [121] "2705" "3991" "6524" "7185" "2658" "3938" "5966" "8521"
#> [129] "627" "64579" "6273" "6002" "23562" "1193" "26330" "3972"
#> [137] "9846" "10039" "8739" "2212" "1472" "25799" "7762" "1395"
#> [145] "6715" "55742"
#>
#> $c6$CAMP_UP.V1_DN
#> [1] "9920" "6515" "6236" "2114" "11031" "114569"
#> [7] "3094" "10069" "8848" "3301" "51363" "2026"
#> [13] "10659" "57602" "8853" "4133" "26289" "667"
#> [19] "894" "55536" "6894" "8303" "5341" "5047"
#> [25] "5210" "5569" "9590" "9208" "4049" "3720"
#> [31] "55190" "493" "2669" "221981" "80727" "54758"
#> [37] "3638" "23621" "7077" "3312" "26115" "5063"
#> [43] "8655" "11167" "6453" "1195" "10000" "10129"
#> [49] "4645" "4688" "5911" "2530" "134111" "4199"
#> [55] "330" "10803" "196264" "9435" "6599" "8932"
#> [61] "7277" "7220" "3783" "4628" "23187" "23786"
#> [67] "10079" "3398" "1975" "4790" "23365" "7114"
#> [73] "10712" "9689" "23022" "51444" "114614" "26022"
#> [79] "66036" "9520" "989" "23208" "7325" "57515"
#> [85] "2739" "253959" "1809" "7343" "1977" "473"
#> [91] "9231" "27445" "10250" "23174" "4942" "22881"
#> [97] "4773" "6565" "23481" "57578" "3566" "39"
#> [103] "65009" "9644" "57523" "9448" "50863" "65018"
#> [109] "10397" "267004" "9308" "27334" "6856" "26220"
#> [115] "64407" "5996" "10381" "7082" "9806" "4673"
#> [121] "3983" "3423" "394" "80022" "10098" "338799"
#> [127] "23136" "6447" "3320" "6427" "55669" "55827"
#> [133] "3488" "60468" "83660" "6626" "51062" "9906"
#> [139] "5358" "55970" "57030" "1112" "26266" "5594"
#> [145] "8927" "7430" "79987" "23344" "1605" "89792"
#> [151] "7538" "801" "3575" "5066" "9991" "6129"
#> [157] "490" "7917" "4674" "2744" "113802" "29079"
#> [163] "64327" "162427" "92181" "840" "162989" "56978"
#> [169] "84640" "57178" "147968" "3704" "817" "124152"
#> [175] "10383" "639" "2354" "5788" "6767" "5055"
#> [181] "100216479" "6812" "301" "78991" "2776" "11126"
#> [187] "55752" "613" "26059" "347733" "10396" "23551"
#> [193] "23576" "27346" "3303" "64231" "23231" "5789"
#> [199] "64114" "57162"
#>
#> $c6$KRAS.50_UP.V1_UP
#> [1] "3598" "2" "6447" "9173" "3673" "25758" "2254" "50486"
#> [9] "793" "3290" "4897" "9732" "9892" "6781" "27112" "1780"
#> [17] "10402" "1038" "6616" "51129" "2115" "50863" "4320" "2745"
#> [25] "5950" "3689" "2119" "5178" "5649" "3080" "55885" "23462"
#> [33] "7015" "79168" "10170" "909" "101" "284266" "2731" "3800"
#> [41] "5473" "29106" "3249" "5100" "3363" "1114" "6374" "2170"
#>
#> $c6$MEL18_DN.V1_DN
#> [1] "5100" "3429" "57084" "5179" "80303" "2353" "28959" "1008"
#> [9] "5121" "9723" "360" "11061" "3400" "11037" "9547" "3773"
#> [17] "684" "6414" "8522" "203" "8835" "29105" "23321" "2620"
#> [25] "7373" "348" "23213" "8190" "886" "4129" "1958" "51454"
#> [33] "5350" "55365" "760" "114884" "55601" "3554" "27087" "10103"
#> [41] "64641" "10879" "2537" "8654" "4061" "1806" "1844" "1917"
#> [49] "40" "55848" "4094" "79090" "9246" "7107" "2" "10891"
#> [57] "7111" "57664" "10451" "9053" "27115" "55228" "140597" "7703"
#> [65] "3433" "23136" "8519" "55022" "10562" "5178" "1396" "25999"
#> [73] "6590" "3728" "10102" "3434" "6337" "28985" "2070" "23316"
#> [81] "55816" "4922" "1381" "9077" "25975" "1299" "5997" "2188"
#> [89] "8633" "8365" "10406" "55603" "54112" "2969" "79870" "9122"
#> [97] "23236" "79630" "7020" "4938" "10481" "1734" "5950" "1644"
#> [105] "9317" "6492" "219654" "23150" "9531" "4329" "10379" "54845"
#> [113] "23171" "64405" "3398" "9627" "4287" "29760" "6657" "1756"
#> [121] "2042" "10611" "8935" "9961" "5274" "1390" "1124" "51760"
#> [129] "11036" "5318" "9747" "744" "57447" "55683" "5142" "84789"
#> [137] "23057" "24148" "2788" "1382" "9262" "6451" "5287" "27165"
#> [145] "23355" "5264" "8788" "8842"
#>
#> $c6$EGFR_UP.V1_DN
#> [1] "4886" "5174" "2674" "9687" "4477" "10395" "4602" "11254"
#> [9] "10561" "10964" "2852" "3667" "1535" "51454" "1960" "9130"
#> [17] "4192" "596" "8357" "3429" "8334" "2581" "8839" "2537"
#> [25] "80303" "8345" "51309" "5567" "8344" "3398" "22996" "10950"
#> [33] "116039" "120" "6947" "3800" "8339" "10388" "51427" "57535"
#> [41] "8343" "79068" "794" "1948" "7594" "6711" "11201" "7504"
#> [49] "8365" "1952" "54894" "6443" "429" "51449" "8204" "22876"
#> [57] "22836" "60481" "11000" "55827" "4277" "57396" "3006" "23089"
#> [65] "51514" "323" "9665" "6744" "4147" "56947" "8346" "25913"
#> [73] "58155" "55008" "89927" "1968" "55635" "288" "7456" "55601"
#> [81] "9747" "8969" "6505" "51071" "1475" "79170" "6445" "22824"
#> [89] "27250" "3480" "55120" "58495" "4092" "83990" "2969" "622"
#> [97] "1299" "2001" "6658" "857" "54145" "4698" "2146" "178"
#> [105] "64699" "1512" "10280" "684" "3375" "80210" "79733" "8805"
#> [113] "1123" "9315" "624" "55714" "54898" "51375" "5241" "3017"
#> [121] "10874" "84869" "65982" "23705" "54892" "57007" "3832" "3983"
#> [129] "3993" "5723" "23312" "839" "3012" "54664" "23165" "2887"
#> [137] "22875" "55034" "9935" "55602" "84909" "29919" "55706" "863"
#> [145] "79868" "1831" "8777" "799" "399664" "1363" "8416" "403"
#> [153] "10098" "56521" "55094" "55251" "79682" "80758" "10125" "56603"
#> [161] "889" "10793" "27295" "24148" "23683" "29994" "10276" "7290"
#> [169] "55159" "56904" "4052" "5954" "6883" "26046" "2059" "23678"
#> [177] "23314" "79718" "57613" "80230" "8269" "64116" "3397" "79184"
#> [185] "51230" "10124" "90806" "54913" "4832" "50865" "6491" "2037"
#> [193] "55729" "11001" "56339" "23015"
#>
#> $c6$KRAS.DF.V1_DN
#> [1] "5743" "3936" "9076" "23242" "3485" "1525" "8462" "6876"
#> [9] "27074" "64221" "54566" "2201" "5723" "51012" "4059" "6668"
#> [17] "26053" "11009" "3604" "29896" "5154" "55076" "80352" "154"
#> [25] "5784" "26628" "23016" "6855" "8936" "3371" "10165" "64418"
#> [33] "64386" "8535" "79868" "1844" "9314" "55258" "4974" "6874"
#> [41] "1271" "23092" "1559" "23615" "1269" "8608" "399664" "9734"
#> [49] "149986" "23046" "57115" "3817" "51226" "79627" "196" "5866"
#> [57] "8731" "4761" "4956" "11010" "9875" "11202" "3224" "4992"
#> [65] "55105" "54546" "463" "623" "7475" "8864" "3451" "5063"
#> [73] "9324" "57506" "23345" "6667" "54955" "8187" "2178" "55930"
#> [81] "7781" "7148" "25818" "79845" "55623" "83481" "1133" "57556"
#> [89] "55915" "3207" "3364" "946" "11097" "4356" "4091" "10620"
#> [97] "914" "11005" "10466" "7345" "4301" "27134" "127534" "9437"
#> [105] "4013" "6568" "10512" "6699" "29113" "26285" "140885" "60676"
#> [113] "92595" "54894" "7109" "79269" "86" "1673" "9972" "126393"
#> [121] "7286" "490" "56475" "3931" "8345" "8337" "3263" "643854"
#> [129] "10892" "55738" "57292" "51533" "7259" "79012" "51660" "3802"
#> [137] "26532" "54587" "57473" "240" "55793" "7403" "4092" "6809"
#> [145] "5652" "23544" "54039" "65999" "2081" "1543" "5129" "60682"
#> [153] "285596" "2596" "79571" "2114" "5979" "9455" "8115" "27445"
#> [161] "9883" "6326" "343068" "8828" "10732" "6753" "28999" "1857"
#> [169] "57415" "9053" "7043" "5079" "3359" "1287" "5731" "3274"
#> [177] "51560" "343071" "221749" "4142" "652" "27128" "6722" "3954"
#> [185] "23552" "8175" "79794" "80168" "245" "1302" "57128" "4803"
#> [193] "3486" "3996"
#>
#> $c6$LTE2_UP.V1_DN
#> [1] "4886" "3434" "3429" "684" "11254" "2537" "10561" "64135"
#> [9] "3956" "23586" "10964" "9687" "55008" "3665" "4938" "2274"
#> [17] "4940" "55601" "2852" "64761" "7980" "3431" "9246" "8839"
#> [25] "24138" "10379" "8519" "1381" "2674" "3430" "9636" "120"
#> [33] "6672" "857" "9830" "3959" "429" "4192" "4277" "23424"
#> [41] "51427" "4939" "1299" "5366" "5698" "10395" "3480" "3717"
#> [49] "467" "6658" "841" "11274" "9111" "6890" "8357" "2887"
#> [57] "23255" "25801" "5174" "7020" "25939" "11098" "7504" "54981"
#> [65] "1475" "794" "22843" "799" "3437" "6566" "8638" "23314"
#> [73] "54809" "4256" "89927" "51083" "1123" "8365" "9926" "54898"
#> [81] "7456" "29761" "3547" "3475" "1837" "5610" "1054" "51191"
#> [89] "55034" "2000" "27295" "26046" "58155" "5577" "306" "54737"
#> [97] "3397" "79365" "79982" "7594" "5046" "11009" "89797" "22876"
#> [105] "9536" "7357" "79068" "23657" "57419" "7699" "10813" "7637"
#> [113] "6505" "25913" "4686" "6840" "3280" "9317" "4071" "23236"
#> [121] "10018" "4147" "10950" "94134" "596" "1024" "8829" "8334"
#> [129] "6197" "5359" "6883" "55714" "185" "8339" "11201" "6049"
#> [137] "2669" "8614" "347902" "55366" "79868" "10443" "51765" "51131"
#> [145] "8204" "771" "55269" "79872" "1265" "863" "182" "23279"
#> [153] "29919" "23254" "2618" "10795" "51761" "2037" "9949" "1960"
#> [161] "2218" "2202" "1844" "23089" "4783" "9612" "706" "55183"
#> [169] "221037" "54700" "22836" "29968" "1647" "54843" "8969" "4851"
#> [177] "9194" "6782" "23283" "3909" "27074" "64860" "10486" "9314"
#> [185] "9107" "5796" "1826" "9818" "1105" "55159" "4651" "11031"
#> [193] "51388" "2969" "7750" "10793"
#>
#> $c6$TBK1.DN.48HRS_DN
#> [1] "8870" "8050" "1950" "1429" "5154" "9703" "5997" "55111" "94239"
#> [10] "2582" "56940" "332" "1861" "2769" "5050" "1738" "9270" "5899"
#> [19] "51569" "64422" "8727" "1633" "51382" "55608" "4482" "8821" "596"
#> [28] "670" "5498" "1846" "3597" "329" "1282" "6804" "10270" "8869"
#> [37] "5696" "54386" "5588" "80347" "8895" "5898" "5889" "983" "57761"
#> [46] "23" "7494" "2958" "3303" "5601"
#>
#> $c6$TBK1.DF_DN
#> [1] "22936" "642" "2803" "29110" "5270" "3267" "29766" "102"
#> [9] "55284" "1836" "9134" "659" "55893" "6198" "7525" "3660"
#> [17] "6734" "22928" "9818" "949" "2040" "65124" "3007" "55038"
#> [25] "51809" "1282" "1021" "2697" "9675" "7003" "3694" "8050"
#> [33] "8266" "4155" "64116" "2186" "2619" "51752" "29123" "1287"
#> [41] "6535" "4646" "894" "83737" "79980" "54876" "79717" "223"
#> [49] "167227" "9928" "10438" "11160" "7057" "6048" "10643" "2801"
#> [57] "4548" "163486" "51134" "8065" "663" "79618" "1525" "28996"
#> [65] "54874" "1398" "51319" "10201" "23405" "1633" "688" "51361"
#> [73] "80347" "5929" "23466" "55322" "10098" "622" "23527" "25978"
#> [81] "56937" "3673" "54908" "55149" "51388" "55320" "9475" "23137"
#> [89] "7014" "29083" "11127" "79183" "10020" "55500" "51621" "23376"
#> [97] "9575" "23190" "645619" "51138" "528" "1308" "6584" "1825"
#> [105] "3434" "23341" "26009" "64750" "4001" "22943" "54700" "51441"
#> [113] "10198" "51449" "839" "10165" "59339" "23767" "5898" "23086"
#> [121] "3006" "8502" "54014" "55601" "64897" "3198" "8148" "23049"
#> [129] "23468" "60560" "1104" "64854" "6645" "57698" "51650" "140609"
#> [137] "10114" "50628" "54680" "1039" "26298" "5154" "6256" "730092"
#> [145] "10640" "79657" "8543" "8202" "23274" "51765" "23683" "4436"
#> [153] "54904" "4750" "598" "10247" "571" "51479" "7443" "9173"
#> [161] "51747" "8575" "51773" "55279" "57187" "9949" "7094" "7586"
#> [169] "9747" "80143" "2773" "55703" "55183" "10949" "79646" "490"
#> [177] "26000" "218" "23389" "996" "8439" "373" "11231" "8364"
#> [185] "5050" "3157" "64864" "84726" "2542" "23326" "55435" "51701"
#> [193] "54819" "3416" "3008" "23607" "7019" "80155" "79982" "4507"
#> [201] "595" "10512" "55032" "54842" "10159" "55159" "3895" "10007"
#> [209] "9748" "23112" "55214" "8609" "3954" "146057" "56886" "55450"
#> [217] "9860" "55005" "865" "51575" "9360" "59338" "3170" "51026"
#> [225] "55213" "10142" "23633" "4763" "3987" "8436" "6018" "11019"
#> [233] "3557" "6595" "79230" "4128" "9536" "5092" "114876" "9682"
#> [241] "901" "1203" "51101" "84864" "10253" "5366" "79768" "55102"
#> [249] "11130" "8777" "5696" "55156" "26065" "4957" "55364" "9169"
#> [257] "4090" "2957" "29907" "10927" "5936" "51129" "26064" "4801"
#> [265] "112" "27125" "9112" "1290" "2591" "5698" "63917" "57613"
#> [273] "26060" "7993" "670" "9766" "11212" "8204" "26031" "5611"
#> [281] "51133" "6949" "25957" "2353" "51079" "51141" "10564"
#>
#> $c6$ERB2_UP.V1_UP
#> [1] "1543" "1048" "116496" "4982" "1846" "1545" "7379" "1601"
#> [9] "4680" "57214" "55790" "6277" "51170" "2034" "112399" "3554"
#> [17] "81031" "3887" "81537" "79679" "2258" "50617" "1848" "8659"
#> [25] "3855" "7852" "602" "9568" "94009" "3783" "79695" "253190"
#> [33] "57016" "2982" "5791" "2026" "93664" "6767" "5142" "9244"
#> [41] "3576" "5763" "58473" "5100" "80761" "27010" "10610" "444"
#> [49] "3694" "4128" "25825" "10577" "27242" "2119" "230" "51097"
#> [57] "6676" "4059" "3338" "5097" "7903" "6662" "8564" "79789"
#> [65] "6712" "55619" "11045" "3913" "6558" "8705" "23180" "6286"
#> [73] "9415" "168544" "25849" "55690" "375056" "7138" "2330" "4582"
#> [81] "2983" "9915" "11320" "10957" "2052" "22998" "51129" "9060"
#> [89] "3691" "7433" "23530" "23596" "3306" "113178" "309" "64856"
#> [97] "8974" "5265" "5878" "7423" "4488" "10076" "151011" "726"
#> [105] "1906" "8612" "53635" "54855" "8714" "43" "767" "9619"
#> [113] "55861" "2264" "10205" "23508" "11138" "58528" "55062" "1525"
#> [121] "7851" "65983" "55885" "10479" "55332" "5507" "79762" "56904"
#> [129] "22891" "8611" "80307" "9518" "4041" "51337" "5144" "831"
#> [137] "4642" "57876" "333" "2593" "4016" "6919" "1646" "7390"
#> [145] "56475" "400451" "55450" "8760" "4833" "10103" "6533" "439921"
#> [153] "50515" "9582" "83464" "8729" "6386" "9351" "29763" "5631"
#> [161] "10397" "23462" "658" "1475" "79153" "64764" "57037" "6303"
#> [169] "4597" "5734" "2771" "4854" "665" "79006" "6310" "4351"
#> [177] "360" "64097" "3778" "54858" "824" "80328" "3217" "9337"
#> [185] "27344" "604" "22924" "9764" "542767" "7408" "25979"
#>
#> $c6$DCA_UP.V1_DN
#> [1] "126321" "339044" "200081" "55035" "93408" "79924" "9439" "8530"
#> [9] "10312" "9392" "79000" "5793" "1361" "55190" "11136" "10734"
#> [17] "57626" "9284" "91355" "6620" "56001" "5300" "643326" "3852"
#> [25] "23368" "6698" "5145" "54093" "9929" "11045" "117247" "80223"
#> [33] "2766" "643328" "9617" "8085" "53405" "112939" "6293" "51257"
#> [41] "2027" "4660" "79768" "29062" "4114" "2516" "79684" "60490"
#> [49] "9623" "653326" "10991" "90957" "474170" "60625" "26040" "26034"
#> [57] "84629" "6478" "79792" "51776" "57209" "8605" "5824" "10443"
#> [65] "4439" "5164" "1263" "80067" "2254" "25844" "25879" "27040"
#> [73] "27251" "23636" "5447" "51310" "57205" "7107" "50937" "11200"
#> [81] "55315" "2842" "6474" "28986" "3458" "9435" "57140" "64850"
#> [89] "5261" "7038" "8995" "83752" "6533" "9684" "54978" "23461"
#> [97] "26287" "84851" "57405" "23481" "6376" "387032" "219654" "64130"
#> [105] "8785" "3442" "6247" "55843" "6317" "22833" "6470" "51135"
#> [113] "388677" "192666" "51133" "10432" "7580" "2875" "11070" "2268"
#> [121] "5310" "116986" "83937" "22834" "1014" "57335" "55731" "6498"
#> [129] "55119" "3909" "26531" "10393" "81578" "763" "23229" "259266"
#> [137] "23151" "23114" "10633" "57402" "8115" "3848" "5317" "63877"
#> [145] "221395" "30848" "10022" "8650" "152100" "22985" "238" "84789"
#> [153] "8484" "4240" "79363" "256227" "140803" "8941" "51450" "8351"
#> [161] "8558" "28831" "10326" "26148" "646541" "55056" "28966" "6911"
#> [169] "4331" "93349" "9013" "51447" "3587" "10948" "779" "9020"
#> [177] "55515" "54875" "55565" "10842" "56983" "2525" "5900" "2895"
#> [185] "23424" "54955" "26504" "9854" "3164" "157567" "7637" "79772"
#> [193] "26145"
#>
#> $c6$GCNP_SHH_UP_EARLY.V1_DN
#> [1] "23524" "56243" "1667" "8788" "5308" "6347" "80761" "124925"
#> [9] "8148" "2012" "6450" "729230" "7409" "3965" "7456" "1130"
#> [17] "58528" "1374" "132720" "4125" "80014" "55787" "1260" "4879"
#> [25] "4645" "331" "3219" "23272" "5191" "54345" "9034" "2649"
#> [33] "10370" "4054" "80820" "6492" "83665" "51025" "1382" "8495"
#> [41] "1535" "10267" "4071" "286826" "444" "7343" "51604" "8320"
#> [49] "388646" "10461" "7786" "3554" "3037" "29015" "10951" "79411"
#> [57] "90102" "2842" "2990" "1427" "1628" "51542" "84978" "50717"
#> [65] "686" "115" "51804" "8399" "6532" "257144" "863" "2554"
#> [73] "6280" "7462" "10322" "4600" "1645" "10769" "5153" "3398"
#> [81] "3213" "26330" "9592" "1642" "8756" "2113" "80279" "57804"
#> [89] "3676" "3169" "5184" "51421" "799" "92747" "4094" "1958"
#> [97] "1594" "8725" "94031" "3936" "84532" "9869" "685" "4851"
#> [105] "2494" "255252" "83941" "10567" "55211" "1264" "57338" "9448"
#> [113] "952" "9356" "145282" "79671" "9573" "80818" "114609" "629"
#> [121] "4486" "51667" "8349" "3458" "7390" "64208" "56605" "2902"
#> [129] "5539" "3280" "51720" "819" "10233" "84889" "722" "55012"
#> [137] "1020" "4256" "412" "84105" "3661" "5897" "2563" "91526"
#> [145] "54386" "10850" "253558" "60672" "7112" "186" "84173" "9630"
#> [153] "83700" "340419" "202" "5733" "51599" "63899" "5604" "54958"
#> [161] "85460" "4929" "126006" "55365" "8653" "745" "3914" "5321"
#> [169] "3350"
#>
#> $c6$SRC_UP.V1_DN
#> [1] "5327" "2837" "29128" "645238" "3955" "4312"
#> [7] "5287" "79159" "11067" "11182" "51352" "9333"
#> [13] "10804" "4319" "79413" "51645" "3656" "5906"
#> [19] "22802" "728689" "4794" "100" "6280" "643650"
#> [25] "27076" "1953" "79642" "4174" "2966" "10733"
#> [31] "23242" "22795" "57523" "124773" "284338" "375298"
#> [37] "3978" "84709" "7111" "2182" "3575" "79153"
#> [43] "2537" "170960" "5091" "6646" "171586" "27094"
#> [49] "86" "127" "100505621" "6374" "90784" "7694"
#> [55] "644337" "55783" "375593" "84315" "647589" "57709"
#> [61] "64946" "1806" "147968" "57561" "3212" "114803"
#> [67] "9837" "201305" "84816" "25885" "57526" "5914"
#> [73] "8829" "9150" "2894" "642771" "402778" "442117"
#> [79] "3713" "494143" "158431" "85373" "10331" "29028"
#> [85] "83879" "2069" "2015" "134145" "26036" "644295"
#> [91] "9064" "79733" "7551" "25786" "127391" "56269"
#> [97] "5055" "4173" "378708" "133418" "58155" "285596"
#> [103] "51380" "56986" "6857" "79723" "55120" "1903"
#> [109] "79628" "1295" "732" "85455" "2676" "260429"
#> [115] "138199" "766" "55182" "4889" "80818" "51117"
#> [121] "340205" "4330" "7262" "56131" "9262" "80157"
#> [127] "6699" "9955" "1102" "4172" "29127" "84542"
#> [133] "84520" "554174" "285181" "9094" "5063" "10501"
#> [139] "54622" "151613" "374666" "3434" "80067" "89887"
#> [145] "29099" "50636" "54991" "83452" "55313" "65065"
#> [151] "643314" "407975" "5318" "10948" "5288" "4314"
#> [157] "54700" "10940" "114769" "266977" "984" "10265"
#> [163] "27185" "57468" "285955" "51633" "285989" "165918"
#> [169] "254122" "8128" "23150" "5734" "23180" "401131"
#> [175] "90507" "126205" "2146" "83849" "28978"
#>
#> $c6$KRAS.LUNG_UP.V1_DN
#> [1] "8581" "6278" "3713" "3851" "43849" "3868"
#> [7] "1014" "51806" "6707" "3963" "3860" "9547"
#> [13] "23242" "5275" "6317" "57016" "5608" "6283"
#> [19] "7051" "5650" "55" "10631" "8424" "1410"
#> [25] "11254" "9935" "57124" "3635" "64108" "1954"
#> [31] "653326" "5287" "23616" "3351" "3848" "27113"
#> [37] "79755" "170679" "1672" "5625" "23498" "6261"
#> [43] "1280" "2215" "129080" "169611" "51384" "57399"
#> [49] "57523" "22802" "282808" "51458" "10076" "79097"
#> [55] "79696" "8852" "11202" "10249" "4804" "200315"
#> [61] "79644" "2327" "1028" "27076" "8608" "8578"
#> [67] "26290" "11012" "222" "8399" "5158" "1382"
#> [73] "56603" "6318" "3485" "7441" "729230" "3866"
#> [79] "10451" "55776" "8495" "9472" "440895" "810"
#> [85] "6519" "3549" "1310" "54587" "1562" "2619"
#> [91] "2560" "6457" "79703" "8743" "23493" "29953"
#> [97] "3352" "1580" "6444" "6536" "11063" "25840"
#> [103] "933" "339457" "80761" "867" "643641" "55610"
#> [109] "81628" "79132" "6336" "54441" "119" "100507605"
#> [115] "27136" "3587" "1133" "5624" "5676" "43"
#> [121] "9651" "778" "2049" "2078" "4004" "8392"
#> [127] "4214" "8842" "79725" "10457" "7018" "11250"
#> [133] "6981" "140" "4161" "5896" "11341" "5064"
#> [139] "29986" "1010" "2668" "7356" "5540" "6712"
#> [145] "79969"
#>
#>
#> $c7
#> $c7$GSE17721_CTRL_VS_POLYIC_12H_BMDM_DN
#> [1] "3667" "81030" "79161" "29110" "79685" "51726" "64215" "1956"
#> [9] "57018" "869" "594" "9147" "5819" "1286" "54926" "284"
#> [17] "55844" "1198" "9986" "799" "1861" "8894" "3065" "2634"
#> [25] "643" "135138" "55248" "55905" "26258" "25801" "7076" "79016"
#> [33] "6879" "192668" "8744" "64147" "3337" "27429" "5685" "6812"
#> [41] "7107" "148" "6532" "53343" "54148" "51283" "5800" "10987"
#> [49] "23187" "7010" "9248" "138429" "57007" "9153" "5228" "64901"
#> [57] "23022" "2596" "64600" "5371" "22990" "6357" "88745" "9517"
#> [65] "138311" "148223" "23325" "6432" "8502" "8767" "22914" "1026"
#> [73] "1357" "10418" "84080" "8883" "51807" "9915" "10948" "1266"
#> [81] "115361" "54514" "118788" "79892" "23601" "961" "7466" "653"
#> [89] "55353" "337867" "5147" "6352" "165679" "201931" "830" "54940"
#> [97] "229" "57169" "5326" "113878" "9320" "4814" "283848" "4921"
#> [105] "5456" "610" "4261" "3588" "1965" "64928" "64231" "6751"
#> [113] "55082" "10981" "10006" "57110" "144233" "10368" "2935" "6518"
#> [121] "1462" "9718" "1859" "7276" "94240" "6396" "79019" "23118"
#> [129] "27101" "10205" "8826" "53340" "6415" "57447" "2641" "23224"
#> [137] "2012" "5600" "55330" "4520" "7297" "10513" "378" "144165"
#> [145] "7855" "87" "375035" "6624" "4241" "9308" "25949" "387338"
#> [153] "55315" "29093" "11057" "5202" "164153" "23760" "8446" "3159"
#> [161] "78986" "23682" "5292" "2017" "83606" "9527" "1513" "1181"
#> [169] "25988" "3480" "116496" "529" "26999" "85415" "129450" "55361"
#> [177] "4093" "7166" "283987" "89" "84993" "339302" "64096" "57348"
#> [185] "9945" "145957" "1834" "5091" "1437" "57130" "126638" "129531"
#> [193] "10620" "1113" "80824" "5937" "79693" "51573" "1398" "79666"
#>
#> $c7$GSE37416_CTRL_VS_0H_F_TULARENSIS_LVS_NEUTROPHIL_DN
#> [1] "100134123" "256130" "280658" "283218" "53820" "23232"
#> [7] "480" "57496" "25849" "1271" "117159" "285696"
#> [13] "9180" "885" "100507299" "9231" "56301" "43847"
#> [19] "143570" "84720" "57540" "204219" "51666" "79819"
#> [25] "29122" "83715" "4179" "127731" "728730" "54881"
#> [31] "1411" "339505" "9509" "100113384" "26222" "642280"
#> [37] "1303" "7221" "100507435" "55891" "4998" "160857"
#> [43] "27345" "26245" "100131733" "5365" "132612" "6512"
#> [49] "27443" "151877" "57051" "57546" "558" "283392"
#> [55] "146849" "9727" "23544" "286254" "285352" "339977"
#> [61] "100288745" "121053" "55998" "1846" "100133205" "65059"
#> [67] "4146" "4881" "26123" "79080" "11259" "1618"
#> [73] "642345" "151254" "57504" "2324" "27143" "123591"
#> [79] "160140" "54959" "83698" "4332" "10651" "85444"
#> [85] "7866" "50651" "619190" "4774" "219537" "100507386"
#> [91] "100287114" "5997" "30812" "389336" "347252" "257103"
#> [97] "4994" "57824" "7173" "340074" "2819" "339352"
#> [103] "116988" "100292443" "100505545" "388011" "400512" "8175"
#> [109] "285593" "253650" "167410" "400952" "124454" "84436"
#> [115] "55065" "56704" "3736" "360205" "146540" "6943"
#> [121] "401220" "400120" "415" "9068" "10439" "11147"
#> [127] "402" "7043" "10569" "1518" "642757" "134353"
#> [133] "55124" "1131" "125965" "29890" "9891" "645566"
#> [139] "256051" "114798" "6402" "79025" "118471" "157927"
#> [145] "29091" "144817" "259287" "4867" "284578" "100507206"
#> [151] "574538" "114783" "57711" "100506314" "168400" "9824"
#> [157] "80174" "2880" "114784" "10923" "113452" "881"
#> [163] "400258" "2938" "1014" "57719" "9229" "63926"
#> [169] "253738" "11202" "146853" "4294" "59277" "3009"
#> [175] "10878" "83595" "339221" "254028" "5906" "6419"
#> [181] "10738" "2921" "1740" "113828" "152789" "28978"
#> [187] "84068" "6317" "10693" "90632" "136157" "283777"
#> [193] "11043" "22925" "285878" "8913" "10893" "100133669"
#> [199] "100130155" "100290557"
#>
#> $c7$GSE12845_IGD_POS_BLOOD_VS_PRE_GC_TONSIL_BCELL_UP
#> [1] "10208" "9552" "126299" "55830" "8642" "10400"
#> [7] "79414" "388" "8971" "6522" "7289" "10365"
#> [13] "54704" "7994" "5195" "4285" "55182" "1487"
#> [19] "27241" "55658" "55347" "23067" "55113" "79873"
#> [25] "9033" "55262" "9990" "741" "11108" "196743"
#> [31] "9402" "64689" "4109" "79639" "1183" "770"
#> [37] "140461" "5016" "56674" "1277" "23059" "9715"
#> [43] "4345" "9934" "51301" "10695" "55657" "55094"
#> [49] "65264" "7923" "4607" "7133" "100287600" "29125"
#> [55] "11132" "10077" "27036" "128553" "9537" "84720"
#> [61] "23600" "26226" "373" "29035" "3725" "5256"
#> [67] "6452" "644128" "5218" "8824" "9467" "5164"
#> [73] "55049" "400961" "1456" "54957" "6441" "57827"
#> [79] "27163" "10412" "8334" "9880" "339287" "51093"
#> [85] "89944" "2288" "27429" "63893" "40" "8100"
#> [91] "6222" "9855" "9611" "91754" "3106" "107"
#> [97] "10116" "10179" "89845" "3720" "6156" "8440"
#> [103] "23259" "1725" "6237" "2247" "79591" "9993"
#> [109] "6137" "260294" "3303" "5252" "4589" "29907"
#> [115] "8363" "55139" "9139" "6602" "197" "80233"
#> [121] "53916" "10076" "55652" "2678" "10473" "83442"
#> [127] "4435" "1974" "728361" "55810" "686" "5681"
#> [133] "25799" "91298" "8722" "6643" "56604" "3705"
#> [139] "6402" "4122" "79608" "57205" "51274" "6374"
#> [145] "6208" "4064" "6169" "90121" "9797" "8407"
#> [151] "1366" "23624" "10014" "9980" "4924" "57060"
#> [157] "23378" "3915" "1409" "5298" "9730" "79594"
#> [163] "53635" "3454" "11176" "55958" "23641" "83638"
#> [169] "9308" "50512" "51458" "79007" "50854" "9674"
#> [175] "7553" "6199" "55205" "29956" "824" "26001"
#> [181] "23250" "63940" "79922" "259197" "10864" "10307"
#> [187] "3875" "58190" "5348" "3823" "51172" "9203"
#> [193] "3315" "166" "112464" "22869" "2596" "3991"
#> [199] "92104" "29937"
#>
#> $c7$GSE17721_POLYIC_VS_GARDIQUIMOD_8H_BMDM_UP
#> [1] "55051" "2199" "10422" "56246" "1606" "80331" "57153" "25842"
#> [9] "10447" "4814" "9619" "3280" "678" "124540" "3074" "57143"
#> [17] "114883" "5662" "23521" "56882" "23144" "116071" "54662" "25801"
#> [25] "4650" "126917" "26469" "5939" "6744" "51673" "79886" "10362"
#> [33] "132" "2314" "10478" "57555" "84681" "23400" "1734" "290"
#> [41] "3476" "8736" "3106" "7402" "3587" "10000" "8763" "7180"
#> [49] "29950" "83877" "10565" "4360" "7011" "80173" "317" "684"
#> [57] "113" "23344" "84336" "54514" "2717" "1384" "53343" "4176"
#> [65] "4794" "1958" "9636" "9587" "27246" "83638" "5524" "5243"
#> [73] "6789" "7320" "6907" "10957" "1108" "60" "1903" "6811"
#> [81] "140456" "701" "5968" "22826" "1902" "23648" "7145" "57633"
#> [89] "3394" "79145" "91947" "4600" "3077" "10106" "3315" "563"
#> [97] "84282" "51635" "817" "6011" "27347" "10910" "430" "1719"
#> [105] "2641" "941" "54440" "5732" "419" "150274" "26279" "79627"
#> [113] "51020" "54467" "5982" "9306" "4939" "9223" "57125" "8460"
#> [121] "7779" "4343" "6774" "64843" "5937" "9937" "161247" "55512"
#> [129] "2534" "3791" "83540" "3781" "51433" "50863" "94240" "26272"
#> [137] "9878" "124460" "8635" "5863" "7099" "54896" "51274" "1198"
#> [145] "57035" "6050" "80017" "3382" "94241" "152877" "2885" "414328"
#> [153] "4038" "1717" "1066" "23198" "4013" "352999" "5015" "57863"
#> [161] "64089" "171177" "340075" "11064" "10437" "117854" "472" "9807"
#> [169] "6671" "374907" "80325" "51475" "5805" "1859" "151295" "55294"
#> [177] "3622" "50865" "375387" "56126" "580" "10923" "2861" "5978"
#> [185] "10948" "4633" "665" "10636" "4772" "717" "3611" "221035"
#> [193] "1831" "128240" "5654" "6051" "4922" "158219" "10156" "11145"
#>
#> $c7$GSE360_CTRL_VS_B_MALAYI_HIGH_DOSE_MAC_UP
#> [1] "5207" "9341" "10102" "11131" "7064" "8045" "9552" "9600"
#> [9] "8443" "2029" "9742" "9063" "2821" "2137" "51382" "27043"
#> [17] "8425" "22930" "6571" "728642" "4477" "54504" "970" "79036"
#> [25] "5000" "22883" "6281" "7709" "5236" "23216" "3693" "56"
#> [33] "8685" "4360" "11119" "25876" "7106" "6672" "5899" "5707"
#> [41] "5547" "4125" "126353" "2155" "1620" "7737" "1562" "1950"
#> [49] "4204" "4719" "3507" "23504" "6538" "23142" "753" "4817"
#> [57] "2553" "6518" "23616" "6059" "2242" "1003" "23163" "9986"
#> [65] "1431" "2263" "1534" "6122" "23673" "4077" "56125" "4025"
#> [73] "25852" "9686" "3842" "8623" "6284" "8260" "53615" "51460"
#> [81] "26065" "2290" "6150" "89927" "3064" "11340" "285282" "4176"
#> [89] "1595" "1804" "5514" "339105" "56171" "9497" "6439" "7022"
#> [97] "10653" "1175" "10895" "2077" "23039" "805" "6618" "10623"
#> [105] "7707" "7994" "8209" "10632" "8439" "219" "6790" "10989"
#> [113] "10204" "5105" "51493" "3959" "163" "3853" "8364" "51083"
#> [121] "3074" "10947" "353" "7764" "4521" "9077" "1845" "1499"
#> [129] "4686" "5411" "54462" "2010" "27250" "22846" "6310" "8881"
#> [137] "90326" "51760" "4072" "2932" "55174" "1999" "2079" "23198"
#> [145] "9123" "55970" "8525" "5033" "2492" "24139" "55752" "6449"
#> [153] "7832" "6599" "2071" "5878" "3758" "4714" "10232" "2665"
#> [161] "4066" "27134" "349152" "26034" "1943" "10014" "54874" "5599"
#> [169] "6875" "9677" "3667" "94239" "3495" "6038" "1718" "2827"
#> [177] "9479" "653188" "5730" "8814" "54788" "6907" "657" "22"
#> [185] "6503" "6536" "3142" "30" "3449" "6302" "10573" "6431"
#> [193] "6574" "9601" "206358" "5175" "11322" "7390" "3185" "25920"
#>
#> $c7$GSE22886_IGG_IGA_MEMORY_BCELL_VS_BLOOD_PLASMA_CELL_UP
#> [1] "26005" "58511" "23515" "4130" "56834" "6155"
#> [7] "5079" "64761" "25850" "6161" "23062" "1293"
#> [13] "780" "5144" "7799" "7597" "3431" "472"
#> [19] "55084" "6228" "100506658" "201163" "55601" "23220"
#> [25] "11346" "79037" "7188" "50862" "4224" "5742"
#> [31] "6709" "51362" "9450" "8942" "8076" "1380"
#> [37] "54877" "7805" "10724" "8622" "4760" "23492"
#> [43] "9487" "10228" "57599" "27042" "3394" "22897"
#> [49] "5293" "55024" "694" "5577" "4215" "65982"
#> [55] "283537" "10486" "80223" "56882" "2308" "11275"
#> [61] "64693" "4653" "10752" "23526" "51312" "8590"
#> [67] "114548" "138050" "6844" "8204" "29887" "54665"
#> [73] "10075" "2317" "9779" "25801" "6167" "79659"
#> [79] "7405" "2534" "7130" "3451" "7852" "63826"
#> [85] "64174" "10129" "5979" "8600" "867" "6139"
#> [91] "971" "10947" "26056" "161291" "2650" "200576"
#> [97] "1911" "11199" "11104" "10252" "2359" "26575"
#> [103] "23508" "10451" "9313" "64077" "3115" "50628"
#> [109] "56101" "79890" "202" "4842" "2114" "55769"
#> [115] "22863" "241" "4915" "911" "115123" "79084"
#> [121] "55128" "5795" "933" "4335" "10982" "3841"
#> [127] "79596" "22906" "51208" "8289" "10047" "11080"
#> [133] "4317" "6777" "26154" "4651" "7050" "4948"
#> [139] "23276" "10879" "10683" "5101" "7225" "8019"
#> [145] "55268" "154881" "155066" "2550" "10148" "80183"
#> [151] "55130" "5074" "79789" "55296" "81545" "822"
#> [157] "25957" "10391" "7913" "26531" "54996" "10734"
#> [163] "8848" "6137" "10637" "10388" "7994" "3680"
#> [169] "79649" "4129" "25928" "10235" "8742" "9882"
#> [175] "8938" "55016" "22838" "1130" "11108" "112"
#> [181] "868" "4853" "64595" "55205" "9378" "55638"
#> [187] "2628" "9308" "54103" "83729" "9162" "147657"
#> [193] "1831" "6154" "23314" "9750" "2982" "1438"
#> [199] "54487" "79600"
#>
#> $c7$GSE339_EX_VIVO_VS_IN_CULTURE_CD8POS_DC_UP
#> [1] "79618" "26750" "55152" "10592" "440275" "1602" "222068" "55975"
#> [9] "5579" "10128" "5997" "6844" "9950" "678" "9869" "10447"
#> [17] "51701" "10211" "7001" "84681" "23152" "5218" "27131" "3066"
#> [25] "7454" "2547" "5436" "3014" "215" "25796" "10111" "51015"
#> [33] "5608" "3708" "4669" "11188" "63940" "6941" "5090" "8745"
#> [41] "7334" "8449" "129285" "51274" "5981" "9094" "390916" "11079"
#> [49] "30000" "8027" "170954" "2617" "51714" "6612" "10038" "983"
#> [57] "9748" "8729" "79709" "7266" "2321" "54529" "9592" "84747"
#> [65] "83742" "113419" "81537" "9555" "4610" "23149" "64976" "199990"
#> [73] "8872" "2589" "10155" "2746" "3608" "5175" "290" "9213"
#> [81] "9314" "50717" "29058" "993" "29074" "348" "57680" "8533"
#> [89] "65123" "79932" "121441" "8869" "4751" "10671" "84233" "51374"
#> [97] "23259" "7462" "4123" "10620" "8772" "64926" "55088" "5498"
#> [105] "2250" "51203" "3200" "27101" "29095" "695" "10432" "6546"
#> [113] "1211" "2542" "10140" "115992" "11051" "2288" "6834" "51371"
#> [121] "171546" "2990" "7375" "256126" "10491" "3603" "5243" "51780"
#> [129] "57544" "64333" "51466" "140609" "10782" "23175" "10112" "9450"
#> [137] "80005" "6001" "6342" "8994" "7174" "84641" "142679" "9133"
#> [145] "10206" "79086" "3077" "125988" "9131" "22821" "51728" "57146"
#> [153] "80317" "4086" "10267" "64949" "80774" "53635" "7756" "151903"
#> [161] "4066" "427" "91663" "10236" "9374" "4087" "84327" "2628"
#> [169] "170463" "835" "11342" "6654" "157769" "9452" "2063" "23204"
#> [177] "10175" "23198" "26469" "50808" "7249" "10054" "3070" "988"
#> [185] "54996" "552900" "1979" "8705" "26035" "51550" "5150" "440574"
#> [193] "84461" "54741" "10519" "10455" "54899" "1650" "3005" "26009"
#>
#> $c7$GSE22886_NAIVE_TCELL_VS_MONOCYTE_DN
#> [1] "3779" "5742" "23643" "11213" "4332" "65220" "51363" "1612"
#> [9] "23325" "29916" "25801" "1475" "3958" "51108" "5580" "10154"
#> [17] "64127" "6280" "5791" "23312" "4245" "523" "6386" "6282"
#> [25] "1318" "9120" "1488" "51296" "2212" "64759" "2203" "929"
#> [33] "64747" "10970" "8804" "2799" "1230" "64218" "7462" "11025"
#> [41] "25797" "1512" "1508" "427" "10981" "834" "6850" "9341"
#> [49] "7805" "7077" "1495" "4055" "7127" "8795" "6888" "2876"
#> [57] "654817" "64419" "115207" "3459" "1848" "2268" "4126" "2896"
#> [65] "54863" "3303" "2131" "7321" "27180" "6283" "4082" "22918"
#> [73] "10859" "55577" "23232" "10327" "27235" "1462" "2512" "7097"
#> [81] "9846" "10261" "54502" "23307" "56935" "3460" "7133" "5359"
#> [89] "2752" "54453" "533" "8741" "10019" "10087" "2180" "5226"
#> [97] "822" "79887" "3074" "11027" "8031" "23603" "1806" "9114"
#> [105] "64342" "50856" "8875" "55763" "23673" "10437" "116985" "2357"
#> [113] "754" "2526" "6556" "1200" "54504" "11337" "637" "29992"
#> [121] "6256" "8301" "1845" "55160" "55803" "29887" "8905" "23654"
#> [129] "10602" "1439" "55819" "80896" "81553" "2745" "8417" "2597"
#> [137] "334" "945" "64581" "4853" "23761" "4758" "1052" "1536"
#> [145] "6821" "604" "571" "5724" "5660" "79772" "10577" "526"
#> [153] "11000" "1730" "9056" "9637" "9958" "10611" "4946" "140885"
#> [161] "57178" "5325" "55911" "4688" "55357" "23092" "200315" "1441"
#> [169] "948" "55640" "10875" "51099" "1051" "51734" "7763" "4689"
#> [177] "58488" "54849" "5509" "2720" "599" "54436" "10533" "79168"
#> [185] "59342" "23433" "8682" "25979" "55701" "23405" "157" "6252"
#> [193] "114548" "10903" "55654" "3101" "58526" "55704" "6809" "10295"
#>
#> $c7$GSE3982_BCELL_VS_TH2_DN
#> [1] "4678" "81851" "124222" "993" "2305" "9590"
#> [7] "78999" "54910" "2289" "6364" "4354" "10483"
#> [13] "8530" "29967" "9232" "9692" "9372" "2491"
#> [19] "6891" "4128" "80072" "5954" "9902" "2534"
#> [25] "5307" "6241" "1164" "378708" "55723" "53616"
#> [31] "9532" "51155" "83447" "9289" "151230" "3567"
#> [37] "11332" "22995" "79682" "81491" "55856" "7712"
#> [43] "10742" "6240" "79022" "5347" "7517" "3846"
#> [49] "29923" "2953" "10615" "313" "55340" "79070"
#> [55] "11222" "51118" "2191" "94081" "7296" "874"
#> [61] "7756" "1656" "26509" "3977" "55559" "375035"
#> [67] "627" "23541" "51659" "8099" "4502" "4676"
#> [73] "9787" "9914" "4783" "23022" "7185" "2034"
#> [79] "57405" "55620" "9200" "64151" "8001" "2928"
#> [85] "54478" "5836" "8553" "2235" "11013" "649"
#> [91] "9908" "4222" "5686" "8390" "81850" "10950"
#> [97] "2563" "940" "2625" "23254" "55131" "2669"
#> [103] "127703" "4709" "3904" "23516" "64785" "7525"
#> [109] "5600" "1317" "4240" "54626" "3142" "25897"
#> [115] "1033" "224" "81839" "7298" "79989" "28755"
#> [121] "10824" "11004" "3067" "10079" "131566" "51171"
#> [127] "8318" "23682" "1644" "5887" "1909" "55176"
#> [133] "55003" "10691" "55750" "1803" "53340" "4602"
#> [139] "23043" "10352" "4628" "204" "55320" "1829"
#> [145] "4815" "56957" "23597" "1719" "10229" "701"
#> [151] "100132476" "904" "55129" "28977" "5774" "9882"
#> [157] "10332" "85458" "2977" "2521" "29088" "2952"
#> [163] "9053" "22928" "3426" "8624" "1718" "9824"
#> [169] "8266" "8821" "80167" "3702" "7307" "79413"
#> [175] "3161" "6390" "81623" "166647" "55732" "3212"
#> [181] "55093" "23413" "54968" "3182" "55713" "2956"
#> [187] "8872" "11113" "6197" "60312" "3269" "84272"
#> [193] "5739" "26298" "3251" "1612" "1452" "51540"
#> [199] "622" "1543"
#>
#> $c7$GSE14769_UNSTIM_VS_120MIN_LPS_BMDM_DN
#> [1] "8491" "5155" "10135" "3106" "54545" "255231" "8639" "56975"
#> [9] "3557" "8204" "7855" "3656" "114548" "317" "57018" "79026"
#> [17] "84419" "10127" "3662" "5922" "9334" "161742" "972" "8445"
#> [25] "10261" "347344" "3398" "6361" "10370" "6482" "51330" "7867"
#> [33] "338339" "22846" "7412" "80219" "4690" "9641" "2170" "10294"
#> [41] "10672" "604" "650" "54785" "220323" "23446" "10818" "9655"
#> [49] "259230" "11104" "7408" "51312" "63943" "10010" "115361" "131566"
#> [57] "9412" "54625" "27230" "2891" "3096" "3663" "56929" "54874"
#> [65] "5552" "168850" "651746" "90353" "22797" "10600" "5606" "1959"
#> [73] "10179" "115207" "5597" "6478" "26054" "23216" "6196" "58527"
#> [81] "5054" "30837" "4783" "1203" "284110" "117584" "5329" "122786"
#> [89] "81565" "467" "3091" "5745" "10678" "6868" "7538" "2011"
#> [97] "7782" "22936" "5520" "5514" "91543" "3431" "2920" "6776"
#> [105] "57169" "5099" "3399" "718" "4288" "51755" "23291" "134285"
#> [113] "4170" "387763" "384" "4502" "80709" "3659" "374" "969"
#> [121] "1844" "2959" "203228" "1960" "8394" "8609" "26205" "10146"
#> [129] "597" "7052" "6542" "10318" "11011" "123879" "1958" "1318"
#> [137] "6401" "1437" "168455" "64651" "1906" "1843" "8553" "55254"
#> [145] "23657" "25932" "10865" "901" "6385" "439996" "10260" "2167"
#> [153] "29923" "7832" "90268" "5998" "84636" "79651" "1201" "10133"
#> [161] "23212" "29887" "201475" "51341" "7844" "5153" "9592" "163859"
#> [169] "220213" "5326" "9709" "10148" "9636" "3586" "1839" "6357"
#> [177] "57213" "117247" "11072" "57633" "2697" "29933" "8819" "26471"
#> [185] "9663" "64135" "125488" "51296" "57823" "29126" "7690" "25976"
#> [193] "6809" "6520" "378" "204851" "1435" "23528" "23135" "11259"
#>
#> $c7$GSE13411_NAIVE_VS_IGM_MEMORY_BCELL_DN
#> [1] "7416" "27304" "79863" "100132341" "26000" "159963"
#> [7] "23015" "54442" "11316" "27102" "8354" "1075"
#> [13] "553115" "3430" "11190" "65080" "54502" "9491"
#> [19] "3939" "79174" "9049" "9817" "632" "10004"
#> [25] "8099" "9552" "7593" "80230" "81620" "80228"
#> [31] "3236" "6738" "327" "9636" "27347" "5079"
#> [37] "10645" "9688" "51172" "3535" "200734" "95"
#> [43] "6888" "1975" "10107" "6718" "126321" "65220"
#> [49] "7134" "30817" "2184" "7644" "57178" "10975"
#> [55] "28823" "23002" "79740" "729230" "79930" "26469"
#> [61] "5184" "138151" "8744" "10529" "4129" "4082"
#> [67] "8666" "5226" "117178" "8815" "5879" "208"
#> [73] "6674" "5496" "1316" "10465" "644096" "1285"
#> [79] "10875" "63916" "8424" "642" "26986" "80222"
#> [85] "29956" "4363" "4704" "7027" "9681" "26472"
#> [91] "10616" "50514" "28960" "5230" "3512" "3507"
#> [97] "7032" "60436" "650" "55332" "23189" "80153"
#> [103] "9583" "7276" "80344" "81552" "23466" "644068"
#> [109] "115817" "6352" "2597" "64419" "826" "578"
#> [115] "5223" "8543" "23203" "7167" "3418" "2110"
#> [121] "11261" "1173" "4609" "9404" "9805" "25906"
#> [127] "54544" "4520" "7014" "8495" "6755" "4191"
#> [133] "2823" "939" "51361" "3945" "6182" "2946"
#> [139] "51237" "9906" "91120" "4676" "24139" "81556"
#> [145] "11278" "6715" "165" "6051" "57406" "3098"
#> [151] "55343" "3215" "51302" "6576" "5300" "5704"
#> [157] "2530" "28992" "226" "55568" "5937" "10897"
#> [163] "6310" "10290" "2494" "83700" "7384" "11145"
#> [169] "5092" "1646" "3912" "7090" "9114" "1380"
#> [175] "6793" "6553" "4642" "2534" "7165" "5139"
#> [181] "23368" "4015" "343071" "5859" "4050" "6850"
#> [187] "9473" "55737" "11118" "5641" "30845" "56005"
#> [193] "79038" "81619" "54780" "10090" "23643" "4172"
#> [199] "5032" "92856"
#>
#> $c7$GSE3982_MAC_VS_NEUTROPHIL_LPS_STIM_DN
#> [1] "4355" "50616" "29994" "221823" "10472" "10017"
#> [7] "754" "11136" "79862" "5899" "79089" "2334"
#> [13] "623" "51564" "6844" "8359" "22980" "3338"
#> [19] "80775" "51631" "26279" "6511" "23401" "26999"
#> [25] "306" "22888" "9870" "6519" "80143" "1490"
#> [31] "8091" "23186" "6559" "5432" "11093" "23"
#> [37] "27301" "25977" "3937" "8349" "55716" "7100"
#> [43] "417" "9814" "3837" "4884" "81543" "79919"
#> [49] "1609" "2922" "79180" "65108" "9445" "64780"
#> [55] "79729" "124044" "8216" "126393" "79818" "1404"
#> [61] "11254" "22990" "55196" "5606" "55111" "1955"
#> [67] "374819" "8876" "6545" "4957" "7832" "7320"
#> [73] "64499" "912" "80093" "9696" "11278" "79048"
#> [79] "6543" "953" "212" "9537" "389906" "9592"
#> [85] "10519" "51193" "60626" "64422" "26020" "23057"
#> [91] "5030" "60506" "51151" "6992" "55690" "11153"
#> [97] "408050" "5799" "222658" "22913" "10631" "79689"
#> [103] "6932" "3250" "10938" "51592" "10928" "3274"
#> [109] "26277" "3082" "6879" "1144" "9372" "23504"
#> [115] "2074" "729238" "54932" "2049" "8354" "84243"
#> [121] "2150" "3488" "64377" "100129460" "26692" "9948"
#> [127] "8361" "343" "2249" "9798" "79727" "7399"
#> [133] "3263" "23214" "221037" "378" "800" "64376"
#> [139] "10077" "5719" "2914" "317648" "23620" "3705"
#> [145] "80183" "4059" "55025" "5746" "3458" "3361"
#> [151] "100128124" "149076" "1553" "10849" "6283" "5053"
#> [157] "553115" "392555" "64211" "23210" "1511" "3805"
#> [163] "26576" "91316" "7375" "22918" "6664" "55238"
#> [169] "7088" "23295" "4294" "8852" "28639" "266629"
#> [175] "241" "8061" "2528" "2765" "10024" "9846"
#> [181] "2134" "8897" "3579" "23237" "1995" "26472"
#> [187] "80774" "8447" "11320" "26094" "135948" "1265"
#> [193] "1870" "51450" "7307" "26112" "26050" "168544"
#> [199] "51372" "8193"
#>
#> $c7$GSE15930_STIM_VS_STIM_AND_TRICHOSTATINA_48H_CD8_T_CELL_DN
#> [1] "5721" "439996" "4343" "3107" "129607" "1616"
#> [7] "284194" "80267" "91543" "6892" "3959" "100506736"
#> [13] "64135" "29761" "103" "3665" "4600" "83982"
#> [19] "6890" "55353" "6737" "5610" "29956" "6498"
#> [25] "23582" "10484" "3430" "57130" "60493" "55970"
#> [31] "7318" "56137" "9636" "53918" "3669" "4144"
#> [37] "79050" "10379" "345611" "10906" "3601" "5720"
#> [43] "10948" "51246" "10678" "163590" "253558" "113402"
#> [49] "79366" "1520" "6908" "26986" "54708" "5394"
#> [55] "400916" "9093" "9034" "757" "9124" "894"
#> [61] "11054" "1201" "285521" "4790" "81617" "79711"
#> [67] "51477" "8106" "23671" "646480" "7277" "3429"
#> [73] "6949" "55012" "9111" "4040" "54676" "54918"
#> [79] "921" "3570" "1890" "27000" "81894" "6734"
#> [85] "7189" "51582" "23070" "8914" "4599" "5371"
#> [91] "2622" "55275" "9" "55177" "3087" "29959"
#> [97] "4772" "8411" "23214" "118980" "6924" "57062"
#> [103] "81849" "118429" "2587" "284371" "673" "7706"
#> [109] "3384" "2869" "8733" "25939" "6303" "7095"
#> [115] "55333" "6814" "462" "9135" "5106" "10651"
#> [121] "4066" "55500" "4524" "84271" "10447" "1848"
#> [127] "4685" "25942" "6891" "28232" "11193" "54764"
#> [133] "8804" "4088" "467" "181" "10063" "1912"
#> [139] "9933" "8864" "1690" "151525" "79923" "3340"
#> [145] "9144" "1235" "8535" "476" "7434" "80326"
#> [151] "387893" "5875" "30000" "9056" "200734" "10869"
#> [157] "2494" "1051" "435" "56941" "87178" "56957"
#> [163] "1188" "57169" "94005" "2048" "6451" "22828"
#> [169] "8850" "11274" "23076" "5578" "6772" "120534"
#> [175] "25929" "56965" "84896" "9958" "10135" "3133"
#> [181] "1907" "11128" "7124" "128869" "5464" "8663"
#> [187] "10322" "29889" "55122" "6001" "8651" "3662"
#> [193] "81558" "567" "9397" "336" "8202" "871"
#> [199] "3106" "1154"
#>
#> $c7$GSE14308_TH2_VS_TH1_UP
#> [1] "26278" "23589" "4267" "5537" "5584" "27334" "7070" "126321"
#> [9] "27109" "2073" "197259" "55093" "29078" "26267" "3624" "10404"
#> [17] "23301" "5723" "140809" "93663" "10209" "991" "202018" "55920"
#> [25] "2580" "29954" "9897" "134359" "8867" "10109" "51398" "10393"
#> [33] "5147" "5684" "9324" "2906" "161742" "129401" "51660" "3572"
#> [41] "5232" "23246" "9688" "5365" "90693" "9061" "65084" "7295"
#> [49] "25897" "6259" "80232" "839" "10973" "9589" "84062" "8128"
#> [57] "55754" "813" "23505" "84464" "57600" "51361" "80146" "1727"
#> [65] "10491" "10075" "27316" "4493" "23424" "27257" "81617" "5939"
#> [73] "57679" "83544" "9394" "81037" "8815" "91612" "4744" "3581"
#> [81] "22868" "5216" "6662" "29765" "2957" "54480" "8621" "8683"
#> [89] "2119" "55717" "388558" "3068" "54788" "57102" "5090" "58476"
#> [97] "6093" "811" "3351" "5334" "54704" "51347" "956" "8733"
#> [105] "2730" "79585" "55793" "5536" "124626" "9874" "56648" "157567"
#> [113] "84933" "6602" "8273" "9761" "51629" "10066" "8214" "9701"
#> [121] "1004" "25921" "388743" "9409" "23025" "84636" "8454" "682"
#> [129] "10171" "55561" "161514" "57630" "2517" "54443" "1282" "57198"
#> [137] "7436" "1174" "144406" "79072" "6897" "8575" "7186" "57222"
#> [145] "1977" "8412" "307" "5832" "93380" "5434" "133619" "55308"
#> [153] "537" "8131" "104" "84803" "255043" "490" "23479" "23041"
#> [161] "2798" "81" "2720" "5049" "587" "124997" "7422" "9373"
#> [169] "3280" "9794" "1838" "84303" "53919" "154791" "3191" "7090"
#> [177] "200845" "29095" "389119" "56946" "57662" "27332" "91373" "55839"
#> [185] "23387" "9712" "170954" "5732" "81624" "200312" "223" "549"
#> [193] "85437" "3188" "324" "1397" "10493" "55644" "57091"
#>
#> $c7$GSE29618_BCELL_VS_MDC_UP
#> [1] "100293440" "23075" "6856" "7799" "5026" "22806"
#> [7] "652493" "5079" "11142" "26228" "9451" "951"
#> [13] "3983" "3535" "399" "7163" "5533" "10447"
#> [19] "55636" "22882" "5450" "8728" "3669" "694"
#> [25] "3566" "330" "4050" "55841" "28823" "11040"
#> [31] "23062" "933" "100293679" "28831" "81606" "930"
#> [37] "6480" "23347" "973" "3507" "931" "5790"
#> [43] "4953" "22837" "3495" "9938" "8440" "26999"
#> [49] "29064" "6711" "26586" "2208" "79368" "100133941"
#> [55] "5336" "55024" "10289" "3514" "11262" "3738"
#> [61] "80183" "28639" "91782" "22800" "2113" "51363"
#> [67] "28912" "10235" "57157" "25825" "1378" "27334"
#> [73] "11009" "10724" "11137" "5287" "84159" "55081"
#> [79] "79789" "975" "9447" "57162" "7088" "11346"
#> [85] "96610" "54855" "51678" "28908" "9448" "91353"
#> [91] "9834" "119" "10734" "3500" "25780" "4609"
#> [97] "9788" "10365" "971" "974" "4907" "113791"
#> [103] "5101" "79161" "6625" "8609" "1236" "1875"
#> [109] "55893" "2553" "4927" "29121" "10628" "1657"
#> [115] "643" "7594" "5368" "654817" "994" "59339"
#> [121] "80264" "64318" "7430" "27314" "25865" "79101"
#> [127] "22936" "55196" "8115" "2841" "200576" "10863"
#> [133] "8910" "9263" "7277" "4983" "51427" "23508"
#> [139] "4297" "120" "7259" "83700" "5218" "23469"
#> [145] "27250" "10133" "23015" "9873" "8395" "60468"
#> [151] "8036" "10181" "2308" "3915" "51696" "6259"
#> [157] "961" "10125" "56242" "1901" "9712" "92482"
#> [163] "3148" "23495" "23479" "285830" "55692" "27075"
#> [169] "4601" "10099" "83478" "9750" "387751" "3708"
#> [175] "360" "10957" "80169" "54386" "489" "678"
#> [181] "1958" "1831" "115123" "1974" "55784" "23325"
#> [187] "29919" "868" "27125" "6643" "91746" "28797"
#> [193] "100290557" "2869" "640" "10493" "1983" "1456"
#> [199] "79703" "4063"
#>
#> $c7$GSE13485_CTRL_VS_DAY3_YF17D_VACCINE_PBMC_DN
#> [1] "6614" "10964" "10561" "54739" "91543" "94240"
#> [7] "51191" "129607" "4599" "11274" "3437" "710"
#> [13] "5610" "3434" "4938" "4600" "26010" "3665"
#> [19] "2633" "83666" "6773" "9636" "4939" "4940"
#> [25] "55803" "147645" "3429" "140691" "9997" "55016"
#> [31] "200315" "55601" "151306" "64761" "23034" "10410"
#> [37] "55008" "950" "11311" "103" "717" "8564"
#> [43] "2537" "23179" "113730" "3433" "10800" "219285"
#> [49] "7444" "26509" "6934" "4061" "5303" "27074"
#> [55] "51056" "221472" "6772" "64135" "51092" "3627"
#> [61] "10989" "91351" "9246" "6373" "1445" "50485"
#> [67] "53838" "25939" "91860" "644" "55120" "64108"
#> [73] "10859" "2965" "79132" "51338" "3490" "116071"
#> [79] "26270" "93343" "2210" "54625" "56935" "712"
#> [85] "6398" "8638" "10111" "684" "114793" "1955"
#> [91] "2215" "1488" "55337" "128346" "5721" "200081"
#> [97] "23367" "10346" "6992" "64418" "84542" "26147"
#> [103] "63894" "5359" "3600" "118932" "57102" "6890"
#> [109] "1514" "9447" "84287" "4522" "2799" "100131434"
#> [115] "158405" "713" "23586" "55100" "1267" "8869"
#> [121] "695" "284837" "5371" "9466" "5373" "9830"
#> [127] "25900" "84864" "100290481" "8574" "25840" "151636"
#> [133] "3937" "51493" "57205" "2643" "57600" "10581"
#> [139] "65220" "54976" "1318" "388722" "51316" "55748"
#> [145] "670" "90827" "84875" "6596" "400941" "51131"
#> [151] "10673" "29901" "85363" "8519" "55858" "6120"
#> [157] "1945" "7410" "141" "3728" "4082" "1028"
#> [163] "10144" "5095" "27348" "55840" "57523" "1666"
#> [169] "3113" "23328" "64759" "2630" "719" "6404"
#> [175] "55308" "10154" "4811" "126792" "145853" "203427"
#> [181] "55133" "6905" "121512" "6619" "23317" "390035"
#> [187] "57514" "118788" "9315" "55743" "4343" "11138"
#> [193] "1524" "100128590" "7092" "7100" "10279" "89845"
#> [199] "6906" "3394"
#>
#> $c7$GSE12366_PLASMA_CELL_VS_MEMORY_BCELL_UP
#> [1] "28972" "80319" "10330" "51186" "145853" "51226"
#> [7] "9524" "55501" "1471" "9540" "10237" "117579"
#> [13] "5997" "122509" "57719" "488" "3017" "57688"
#> [19] "4121" "3507" "84281" "79876" "64116" "9693"
#> [25] "1305" "5575" "7248" "54732" "55237" "23710"
#> [31] "2644" "6510" "116068" "64770" "100240728" "57210"
#> [37] "25829" "29100" "8733" "5273" "55254" "3669"
#> [43] "84750" "84981" "339483" "28785" "60370" "9061"
#> [49] "317649" "123283" "92689" "147004" "84920" "6811"
#> [55] "54823" "55757" "55704" "7163" "157860" "10861"
#> [61] "80765" "83852" "644128" "56005" "338864" "64110"
#> [67] "1039" "23588" "284187" "5701" "60490" "11231"
#> [73] "22818" "9451" "3384" "5868" "10103" "55937"
#> [79] "80267" "26579" "10493" "100507299" "8943" "10549"
#> [85] "127733" "84669" "2734" "84080" "2812" "64241"
#> [91] "2590" "79139" "10257" "151473" "321" "23480"
#> [97] "26227" "51439" "10113" "9276" "100129069" "6329"
#> [103] "9685" "60559" "220323" "26018" "284040" "144535"
#> [109] "6461" "64374" "100131993" "2950" "10483" "90326"
#> [115] "55540" "8535" "8732" "892" "11041" "342357"
#> [121] "7174" "100505641" "25930" "28513" "6675" "26003"
#> [127] "9638" "1420" "100132741" "64399" "1585" "8501"
#> [133] "2878" "6745" "8974" "3416" "100507424" "58505"
#> [139] "51364" "81502" "100506451" "4739" "23224" "28786"
#> [145] "5802" "9080" "85365" "3012" "92162" "6734"
#> [151] "11152" "10170" "6480" "7106" "1535" "11092"
#> [157] "28912" "6441" "401264" "126520" "9236" "79575"
#> [163] "115704" "1041" "29968" "84893" "8344" "55806"
#> [169] "54867" "54480" "4710" "8291" "2859" "8575"
#> [175] "100291336" "26090" "10048" "7832" "79770" "10954"
#> [181] "27293" "1044" "9399" "221476" "3195" "6446"
#> [187] "10802" "29799" "84693" "199857" "335" "8669"
#> [193] "10263" "7139" "29925" "414918" "1534" "8073"
#> [199] "51065" "58488"
#>
#> $c7$GSE27786_CD4_TCELL_VS_ERYTHTROBLAST_UP
#> [1] "9774" "5580" "9694" "8993" "79713" "129285" "6834" "56925"
#> [9] "51535" "23569" "3660" "51371" "22928" "10539" "4215" "149986"
#> [17] "4644" "84522" "57473" "5926" "23065" "55227" "6990" "9830"
#> [25] "55" "115024" "29109" "10743" "55676" "51366" "115004" "51547"
#> [33] "11020" "2542" "90826" "5261" "51021" "10745" "7077" "353322"
#> [41] "51441" "26260" "126282" "9360" "257062" "1769" "23246" "5334"
#> [49] "5359" "7538" "27" "23548" "64897" "84890" "64777" "51031"
#> [57] "80351" "253558" "30837" "54822" "53938" "10947" "79863" "57700"
#> [65] "115825" "7050" "6095" "1025" "84174" "79366" "5810" "127281"
#> [73] "128977" "84937" "57446" "8539" "10946" "10620" "166379" "22933"
#> [81] "10984" "960" "3840" "81873" "27335" "51773" "9716" "7284"
#> [89] "51759" "201965" "131450" "23091" "6018" "24148" "6443" "55794"
#> [97] "6100" "51606" "2720" "56919" "4240" "403313" "9013" "1967"
#> [105] "1565" "6907" "153396" "4664" "3716" "51079" "9202" "286075"
#> [113] "64087" "158234" "23268" "6815" "83451" "54707" "9533" "5576"
#> [121] "128240" "23059" "65110" "11099" "4700" "1121" "54968" "4689"
#> [129] "51124" "55051" "133619" "6948" "79070" "51292" "2517" "25816"
#> [137] "10948" "2803" "4033" "219402" "26093" "55763" "57580" "54014"
#> [145] "55636" "55646" "1453" "55165" "10320" "54877" "23443" "84317"
#> [153] "5991" "55326" "84859" "283742" "826" "57533" "124565" "143888"
#> [161] "5663" "55248" "374291" "9446" "9325" "79631" "1454" "8621"
#> [169] "7332" "5996" "9620" "4913" "60490" "256329" "166" "11079"
#> [177] "10072" "23201" "142" "151987" "4236" "162073" "5142" "115708"
#> [185] "91010" "28988" "25844" "23405" "8505" "8085" "64784" "84295"
#> [193] "3267" "4126" "4335" "375056" "26060" "11188" "3301" "64210"
#>
#> $c7$GSE7852_TREG_VS_TCONV_LN_UP
#> [1] "7464" "79971" "196" "84959" "92906" "81618"
#> [7] "11174" "8784" "9308" "3662" "23670" "57620"
#> [13] "5269" "57326" "23164" "64866" "56171" "60682"
#> [19] "201799" "54103" "692205" "23382" "116496" "3685"
#> [25] "55785" "9882" "23176" "151742" "145508" "8611"
#> [31] "254887" "58528" "84282" "10725" "5664" "84525"
#> [37] "199786" "8530" "10148" "1021" "57157" "4907"
#> [43] "4354" "644353" "8835" "953" "342371" "26031"
#> [49] "7133" "11332" "114907" "8111" "57222" "27090"
#> [55] "1846" "113201" "27071" "558" "6483" "340152"
#> [61] "3394" "126669" "6051" "256643" "5332" "5783"
#> [67] "11037" "2149" "64114" "85463" "83478" "36"
#> [73] "22876" "1234" "10219" "58489" "729230" "307"
#> [79] "6513" "26018" "26027" "157378" "79026" "122786"
#> [85] "22881" "5996" "253558" "3594" "401546" "26115"
#> [91] "10825" "23075" "2339" "975" "2745" "3682"
#> [97] "3015" "29126" "10875" "57560" "1235" "57045"
#> [103] "23239" "64092" "285382" "50943" "58486" "25907"
#> [109] "8897" "55024" "6821" "27111" "10079" "6256"
#> [115] "6504" "3898" "11152" "1316" "389856" "942"
#> [121] "247" "5355" "112574" "9658" "8575" "64332"
#> [127] "51101" "64781" "4953" "23052" "10955" "9034"
#> [133] "1756" "23355" "5325" "64718" "57584" "23169"
#> [139] "150368" "3998" "6584" "8829" "6646" "23258"
#> [145] "6095" "221002" "10392" "3099" "3559" "51542"
#> [151] "29969" "9173" "59277" "1326" "2623" "27244"
#> [157] "59342" "100129128" "57507" "63971" "160857" "51768"
#> [163] "10397" "91663" "4084" "488" "169200" "133308"
#> [169] "1154" "5445" "5179" "6515" "486" "79874"
#> [175] "5966" "4147" "2983" "3915" "1495" "8694"
#> [181] "837" "2634" "9833" "4689" "9734" "10213"
#> [187] "653361" "400746" "4306" "3615" "55313" "286827"
#> [193] "6451" "4209" "9830" "283489" "93663" "115361"
#> [199] "7293" "154043"
#>
#> $c7$GSE14000_UNSTIM_VS_16H_LPS_DC_UP
#> [1] "7284" "6310" "201562" "54440" "56986" "26123"
#> [7] "515" "7267" "219654" "56996" "23314" "4130"
#> [13] "5859" "64098" "286101" "3603" "440574" "63977"
#> [19] "9791" "64798" "255031" "6461" "1161" "8195"
#> [25] "6207" "57103" "403" "29796" "51084" "284029"
#> [31] "1836" "60314" "8677" "100129550" "219771" "11311"
#> [37] "114926" "8396" "83787" "11031" "10899" "10801"
#> [43] "79720" "64393" "79890" "402" "51596" "283431"
#> [49] "729082" "79817" "6603" "84148" "84967" "57704"
#> [55] "440957" "90231" "64170" "10904" "64333" "83938"
#> [61] "51205" "55347" "146223" "10300" "10634" "2535"
#> [67] "8793" "133418" "5613" "6146" "4722" "8019"
#> [73] "100289086" "84276" "54677" "5175" "84262" "8733"
#> [79] "6143" "29960" "84795" "51522" "10948" "100289420"
#> [85] "7867" "79080" "54930" "282974" "27335" "7414"
#> [91] "9466" "3416" "3632" "4215" "64115" "4154"
#> [97] "26520" "8459" "125144" "5198" "6821" "6130"
#> [103] "79707" "51121" "51706" "10476" "145853" "80205"
#> [109] "64757" "4707" "9581" "10972" "9673" "1497"
#> [115] "90410" "25828" "1979" "3033" "6256" "100287081"
#> [121] "54432" "5742" "140707" "57446" "9815" "51329"
#> [127] "9653" "90871" "3281" "92017" "23654" "2101"
#> [133] "23326" "7388" "51763" "23344" "57820" "8761"
#> [139] "8522" "64147" "8935" "3987" "5607" "23765"
#> [145] "9454" "23731" "23521" "2271" "27131" "150771"
#> [151] "6157" "115992" "79646" "9556" "60559" "8694"
#> [157] "4033" "130074" "5601" "55847" "56998" "56926"
#> [163] "83449" "9203" "283508" "4350" "23475" "653121"
#> [169] "114928" "489" "1350" "25894" "79718" "28951"
#> [175] "8533" "55333" "51693" "286109" "51657" "945"
#> [181] "54802" "6159" "56262" "4712" "8536" "10732"
#> [187] "5867" "55810" "57563" "23313" "84233" "10077"
#> [193] "284184" "6767" "949" "84279" "10844" "56180"
#> [199] "53834" "91689"
#>
#>